Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37866-201ENSMUST00000191950 696 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm43559-201ENSMUST00000198755 466 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm18597-201ENSMUST00000209519 694 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm7422-201ENSMUST00000220115 640 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sdc1P18828 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm5265-201ENSMUST00000076828 342 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22979-201ENSMUST00000082609 159 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc1P18828 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm25526-201ENSMUST00000104332 132 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm13555-201ENSMUST00000121668 319 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm12238-201ENSMUST00000127764 124 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm22726-201ENSMUST00000158089 179 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm23895-201ENSMUST00000158108 160 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm25860-201ENSMUST00000158252 126 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm17119-201ENSMUST00000163943 280 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm29553-201ENSMUST00000189692 279 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm37239-201ENSMUST00000193510 141 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm7449-201ENSMUST00000194393 663 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm29754-201ENSMUST00000206269 358 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm7380-201ENSMUST00000211599 466 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm46193-201ENSMUST00000219399 364 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gm2446-201ENSMUST00000220144 772 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Gm7753-201ENSMUST00000221007 867 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc1P18828 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sdc1P18828 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Sdc1P18828 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Sdc1P18828 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sdc1P18828 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sdc1P18828 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Mir706-201ENSMUST00000102262 84 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm14448-201ENSMUST00000116383 210 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm14940-201ENSMUST00000119309 495 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm16354-201ENSMUST00000155376 150 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm23228-201ENSMUST00000157296 270 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm20698-201ENSMUST00000175657 233 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Mir6402-201ENSMUST00000183406 80 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Mir7074-201ENSMUST00000183884 63 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm27700-201ENSMUST00000185003 81 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm7329-201ENSMUST00000185915 210 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm3489-201ENSMUST00000190083 528 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm44954-201ENSMUST00000208513 227 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm45395-201ENSMUST00000209891 559 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Gm46369-201ENSMUST00000221577 401 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sdc1P18828 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.43□□□□□ -2.02
Sdc1P18828 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sdc1P18828 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sdc1P18828 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms