Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.23□□□□□ -1.73
Hoxd3P09027 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm14871-201ENSMUST00000119056 194 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm14748-201ENSMUST00000119819 411 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm15428-201ENSMUST00000121352 333 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm23752-201ENSMUST00000157584 115 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm22611-201ENSMUST00000158288 150 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm24885-201ENSMUST00000158783 270 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm23872-201ENSMUST00000175432 77 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm28627-201ENSMUST00000186141 453 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm29454-201ENSMUST00000190805 393 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm25930-201ENSMUST00000082785 107 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm24204-201ENSMUST00000082950 107 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Hoxd3P09027 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.23□□□□□ -1.73
Hoxd3P09027 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.23□□□□□ -1.73
Hoxd3P09027 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Hoxd3P09027 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm14601-201ENSMUST00000120892 236 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm13419-201ENSMUST00000121711 271 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm16218-201ENSMUST00000155424 388 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm25824-201ENSMUST00000157092 121 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm22916-201ENSMUST00000157616 119 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm24015-201ENSMUST00000157725 232 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm16162-201ENSMUST00000162296 297 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm22420-201ENSMUST00000178795 126 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm28017-201ENSMUST00000183434 126 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm2914-201ENSMUST00000186120 328 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm28148-201ENSMUST00000186924 697 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm37693-201ENSMUST00000194562 234 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.22□□□□□ -1.73
Hoxd3P09027 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm23686-201ENSMUST00000083241 164 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Mir188-201ENSMUST00000083464 68 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm23039-201ENSMUST00000083870 161 ntBASIC4.22□□□□□ -1.73
Hoxd3P09027 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxd3P09027 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hoxd3P09027 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms