Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm44355-201ENSMUST00000200417 104 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.33□□□□□ -1.88
Hcn1O88704 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm23932-201ENSMUST00000082914 107 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Hcn1O88704 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Hcn1O88704 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm3370-201ENSMUST00000171785 500 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm27580-201ENSMUST00000183666 149 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Mir6382-201ENSMUST00000184055 110 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm5268-201ENSMUST00000189212 940 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm18956-201ENSMUST00000192857 480 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm43556-201ENSMUST00000196186 681 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm45192-201ENSMUST00000206749 283 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm45245-201ENSMUST00000210082 376 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm45814-201ENSMUST00000212646 775 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.32□□□□□ -1.88
Hcn1O88704 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.32□□□□□ -1.88
Hcn1O88704 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Hcn1O88704 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hcn1O88704 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.32□□□□□ -1.88
Hcn1O88704 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Hcn1O88704 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm25727-201ENSMUST00000104522 131 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm12640-201ENSMUST00000120097 310 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm11260-201ENSMUST00000121163 942 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm25052-201ENSMUST00000122661 158 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm22792-201ENSMUST00000157225 133 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm29073-201ENSMUST00000185563 664 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm29165-201ENSMUST00000190655 664 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm29211-201ENSMUST00000191470 664 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm37641-201ENSMUST00000193837 239 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm35876-201ENSMUST00000205044 459 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm45590-201ENSMUST00000209715 262 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.31□□□□□ -1.88
Hcn1O88704 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn1O88704 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Hcn1O88704 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm26206-201ENSMUST00000082908 110 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.31□□□□□ -1.88
Hcn1O88704 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hcn1O88704 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hcn1O88704 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Hcn1O88704 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hcn1O88704 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hcn1O88704 Gm24096-201ENSMUST00000103905 110 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm24403-201ENSMUST00000104616 130 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm14751-201ENSMUST00000117693 222 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm11577-201ENSMUST00000118030 737 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm8858-201ENSMUST00000118259 342 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm13751-201ENSMUST00000120280 752 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm14428-201ENSMUST00000120408 822 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm15014-201ENSMUST00000120742 258 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm11891-201ENSMUST00000121241 619 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm13356-201ENSMUST00000121678 335 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm25341-201ENSMUST00000157461 268 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm24061-201ENSMUST00000157489 120 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm24534-201ENSMUST00000157949 291 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm25438-201ENSMUST00000158281 110 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hcn1O88704 Mir6914-201ENSMUST00000184999 69 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Gm19498-201ENSMUST00000191128 331 ntBASIC3.3□□□□□ -1.88
Hcn1O88704 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.3□□□□□ -1.88
Hcn1O88704 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.3□□□□□ -1.88
Hcn1O88704 Gm43415-201ENSMUST00000201934 750 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms