Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mir1192-201ENSMUST00000116976 121 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm12656-201ENSMUST00000118149 577 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC2.26□□□□□ -2.05
Col5a1O88207 Gm24212-201ENSMUST00000158258 132 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm24317-201ENSMUST00000178536 107 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col5a1O88207 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col5a1O88207 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.26□□□□□ -2.05
Col5a1O88207 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm23460-201ENSMUST00000083258 109 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Gm23102-201ENSMUST00000083724 116 ntBASIC2.26□□□□□ -2.05
Col5a1O88207 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col5a1O88207 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col5a1O88207 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Col5a1O88207 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm15025-201ENSMUST00000118434 418 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm15162-201ENSMUST00000119325 283 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm16569-201ENSMUST00000160526 314 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col5a1O88207 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col5a1O88207 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm38080-201ENSMUST00000194035 268 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm44490-201ENSMUST00000198566 127 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Gm45772-201ENSMUST00000212961 240 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm19233-201ENSMUST00000219772 936 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col5a1O88207 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col5a1O88207 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Col5a1O88207 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col5a1O88207 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.25□□□□□ -2.05
Col5a1O88207 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm12392-201ENSMUST00000118014 938 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm16383-201ENSMUST00000118122 232 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm13341-201ENSMUST00000120780 672 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm12313-201ENSMUST00000121347 421 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm14559-201ENSMUST00000121745 496 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm11575-201ENSMUST00000122243 228 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm22985-201ENSMUST00000122754 116 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm25902-201ENSMUST00000158493 318 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Mir669n-201ENSMUST00000158636 54 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm26004-201ENSMUST00000158804 116 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm16232-201ENSMUST00000162856 167 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm22192-201ENSMUST00000175128 85 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm37934-201ENSMUST00000192902 402 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm44395-201ENSMUST00000197056 153 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm44088-201ENSMUST00000204595 237 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.24□□□□□ -2.05
Col5a1O88207 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col5a1O88207 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col5a1O88207 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm25632-201ENSMUST00000083112 85 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm25005-201ENSMUST00000083812 156 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col5a1O88207 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Col5a1O88207 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Col5a1O88207 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col5a1O88207 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm2389-201ENSMUST00000160487 189 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.24□□□□□ -2.05
Col5a1O88207 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm28627-201ENSMUST00000186141 453 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Col5a1O88207 Gm29288-201ENSMUST00000191582 901 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Mir703-201ENSMUST00000197105 109 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm43975-201ENSMUST00000203023 481 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm34701-202ENSMUST00000204685 360 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm23407-201ENSMUST00000082538 91 ntBASIC2.24□□□□□ -2.05
Col5a1O88207 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col5a1O88207 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Col5a1O88207 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col5a1O88207 Gm12941-201ENSMUST00000117934 220 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Gm15157-201ENSMUST00000121852 702 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms