Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm38329-201ENSMUST00000193473 427 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm43587-201ENSMUST00000199590 204 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm15235-201ENSMUST00000200572 194 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm23444-201ENSMUST00000082922 191 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Gm24917-201ENSMUST00000083935 104 ntBASIC2.36□□□□□ -2.03
Sdc4O35988 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sdc4O35988 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Sdc4O35988 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Sdc4O35988 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sdc4O35988 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sdc4O35988 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm12230-201ENSMUST00000118301 454 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm24937-201ENSMUST00000122597 134 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm22226-201ENSMUST00000157355 109 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Mir6393-201ENSMUST00000183709 94 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm27959-201ENSMUST00000185172 111 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm18855-201ENSMUST00000206689 570 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sdc4O35988 Gm45687-201ENSMUST00000209454 155 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm45522-201ENSMUST00000210784 166 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sdc4O35988 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sdc4O35988 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.35□□□□□ -2.03
Sdc4O35988 Mir344e-201ENSMUST00000104677 66 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm14843-201ENSMUST00000119596 212 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm9440-201ENSMUST00000119667 539 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm22664-201ENSMUST00000158719 105 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm16584-201ENSMUST00000159267 189 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Sdc4O35988 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Sdc4O35988 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sdc4O35988 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm45078-201ENSMUST00000205343 546 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm18899-201ENSMUST00000217663 546 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm9762-201ENSMUST00000036976 444 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc4O35988 Gm25130-201ENSMUST00000082650 156 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.34□□□□□ -2.03
Sdc4O35988 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.34□□□□□ -2.04
Sdc4O35988 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc4O35988 Gm650-201ENSMUST00000144428 1551 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Gm25094-201ENSMUST00000103992 131 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Gm25485-201ENSMUST00000104120 132 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Sdc4O35988 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Gm22839-201ENSMUST00000158436 304 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Gm16561-201ENSMUST00000163001 192 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.33□□□□□ -2.04
Sdc4O35988 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc4O35988 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Sdc4O35988 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Sdc4O35988 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.33□□□□□ -2.04
Sdc4O35988 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc4O35988 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.32□□□□□ -2.04
Sdc4O35988 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm23577-201ENSMUST00000103950 110 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm14794-201ENSMUST00000118181 192 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm12871-201ENSMUST00000118758 438 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm11356-201ENSMUST00000118974 192 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm14589-201ENSMUST00000121640 727 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm23033-201ENSMUST00000157996 134 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm25971-201ENSMUST00000158953 286 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc4O35988 Gm43722-201ENSMUST00000196054 124 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm44348-201ENSMUST00000200165 122 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Mir497-201ENSMUST00000200557 84 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.32□□□□□ -2.04
Sdc4O35988 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.32□□□□□ -2.04
Sdc4O35988 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.32□□□□□ -2.04
Sdc4O35988 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Sdc4O35988 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sdc4O35988 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc4O35988 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sdc4O35988 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sdc4O35988 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm14786-201ENSMUST00000117127 944 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm14880-201ENSMUST00000117581 292 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm14652-201ENSMUST00000118479 235 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm15106-201ENSMUST00000119691 821 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms