Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.15□□□□□ -1.74
Pcdh1F7BJK1 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
Pcdh1F7BJK1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Pcdh1F7BJK1 Mir690-201ENSMUST00000102110 109 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm13386-201ENSMUST00000117677 124 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm15603-201ENSMUST00000119252 492 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm14008-201ENSMUST00000120483 274 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm16345-201ENSMUST00000146065 158 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm25824-201ENSMUST00000157092 121 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm24876-201ENSMUST00000158780 92 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm27551-201ENSMUST00000184258 77 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm29352-201ENSMUST00000188054 544 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm28830-201ENSMUST00000188192 213 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm43286-201ENSMUST00000197420 424 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm45313-201ENSMUST00000210584 178 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm18320-201ENSMUST00000211304 595 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm20368-201ENSMUST00000220716 301 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Snora23-201ENSMUST00000082517 184 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm23741-201ENSMUST00000097237 171 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Pcdh1F7BJK1 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm3267-201ENSMUST00000118671 473 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm13932-201ENSMUST00000120873 610 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm12779-201ENSMUST00000121496 143 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm12815-201ENSMUST00000121737 135 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm13007-201ENSMUST00000121866 365 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm23534-201ENSMUST00000157539 97 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm23258-201ENSMUST00000158319 106 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm2389-201ENSMUST00000160487 189 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm17109-201ENSMUST00000163985 358 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Mir3062-201ENSMUST00000174986 105 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm23864-201ENSMUST00000177607 107 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm22917-201ENSMUST00000180116 110 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Mir6344-201ENSMUST00000183462 104 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm27355-201ENSMUST00000185045 128 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm44330-201ENSMUST00000200106 143 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm44816-201ENSMUST00000206666 477 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Pcdh1F7BJK1 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Mir1188-201ENSMUST00000116756 120 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm12062-201ENSMUST00000117533 259 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm11429-201ENSMUST00000119089 144 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm11894-201ENSMUST00000121579 328 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm15212-201ENSMUST00000122403 466 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm22336-201ENSMUST00000157719 107 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm23499-201ENSMUST00000157736 268 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms