Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm43115-201ENSMUST00000196244 160 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm44830-201ENSMUST00000207667 584 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm44600-201ENSMUST00000208540 111 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm46146-201ENSMUST00000217483 346 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm9845-201ENSMUST00000056409 598 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm22265-201ENSMUST00000082947 116 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Srp54bE9PXC0 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm13046-201ENSMUST00000117391 501 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm11490-201ENSMUST00000118128 272 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm15142-201ENSMUST00000121013 856 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm22521-201ENSMUST00000158272 134 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm23415-201ENSMUST00000175519 83 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm25874-201ENSMUST00000178030 79 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm21894-201ENSMUST00000179631 546 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm37979-201ENSMUST00000193065 712 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm37732-201ENSMUST00000194377 316 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm43198-201ENSMUST00000200927 326 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm7946-201ENSMUST00000203326 958 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Srp54bE9PXC0 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm26002-201ENSMUST00000101915 107 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm12492-201ENSMUST00000117665 564 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm23671-201ENSMUST00000157472 103 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm29104-201ENSMUST00000186304 222 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm45023-201ENSMUST00000207951 379 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm44594-201ENSMUST00000208982 407 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gm45860-201ENSMUST00000212700 334 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Srp54bE9PXC0 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Gm25308-201ENSMUST00000104171 158 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Gm6587-201ENSMUST00000120219 613 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Gm25490-201ENSMUST00000158734 130 ntBASIC3.25□□□□□ -1.89
Srp54bE9PXC0 Gm2930-201ENSMUST00000170403 474 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms