Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.58□□□□□ -2
IsxA1A546 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Gm24119-201ENSMUST00000103979 246 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm14579-201ENSMUST00000117068 283 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm13731-201ENSMUST00000117332 196 ntBASIC2.58□□□□□ -2
IsxA1A546 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm22957-201ENSMUST00000122511 123 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm24787-201ENSMUST00000157380 123 ntBASIC2.58□□□□□ -2
IsxA1A546 Mir3112-201ENSMUST00000175431 82 ntBASIC2.58□□□□□ -2
IsxA1A546 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Gm21842-201ENSMUST00000177552 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21626-201ENSMUST00000177791 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21562-201ENSMUST00000177888 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21539-201ENSMUST00000177925 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm17522-201ENSMUST00000178144 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21599-201ENSMUST00000178249 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm21914-201ENSMUST00000178452 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm24019-201ENSMUST00000178620 107 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21723-201ENSMUST00000178692 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21916-201ENSMUST00000178771 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21801-201ENSMUST00000178865 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21633-201ENSMUST00000178941 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm26243-201ENSMUST00000179260 107 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21821-201ENSMUST00000179646 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.58□□□□□ -2
IsxA1A546 Gm21588-201ENSMUST00000180074 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21780-201ENSMUST00000180128 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21572-201ENSMUST00000180134 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm21529-201ENSMUST00000180175 498 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm24969-201ENSMUST00000180331 79 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm29370-202ENSMUST00000187476 499 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm29330-201ENSMUST00000190032 699 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm28098-201ENSMUST00000191361 699 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm37288-201ENSMUST00000193963 334 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm37002-201ENSMUST00000194560 373 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.58□□□□□ -2
IsxA1A546 Gm18598-201ENSMUST00000207724 597 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.58□□□□□ -2
IsxA1A546 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.58□□□□□ -2
IsxA1A546 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
IsxA1A546 Gm23296-201ENSMUST00000082555 107 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm23615-201ENSMUST00000082602 65 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm24859-201ENSMUST00000082729 107 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm23939-201ENSMUST00000082880 133 ntBASIC2.58□□□□□ -2
IsxA1A546 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.58□□□□□ -2
IsxA1A546 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
IsxA1A546 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.58□□□□□ -2
IsxA1A546 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
IsxA1A546 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
IsxA1A546 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Gm23747-201ENSMUST00000104228 131 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Gm13046-201ENSMUST00000117391 501 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm12268-201ENSMUST00000118398 442 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm14159-201ENSMUST00000119832 451 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Gm17186-201ENSMUST00000171742 456 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm22853-201ENSMUST00000174974 131 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Gm26297-201ENSMUST00000179464 132 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm26701-201ENSMUST00000181571 234 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.57□□□□□ -2
IsxA1A546 Mir6383-201ENSMUST00000184545 116 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.57□□□□□ -2
IsxA1A546 Gm43043-201ENSMUST00000196579 412 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm43541-201ENSMUST00000197208 581 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.57□□□□□ -2
IsxA1A546 Gm43224-201ENSMUST00000201567 898 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm18043-201ENSMUST00000216741 739 ntBASIC2.57□□□□□ -2
IsxA1A546 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.57□□□□□ -2
IsxA1A546 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.57□□□□□ -2
IsxA1A546 Gm25799-201ENSMUST00000082643 107 ntBASIC2.57□□□□□ -2
IsxA1A546 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.57□□□□□ -2
IsxA1A546 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.57□□□□□ -2
IsxA1A546 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.57□□□□□ -2
IsxA1A546 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
IsxA1A546 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.56□□□□□ -2
IsxA1A546 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IsxA1A546 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.56□□□□□ -2
IsxA1A546 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.56□□□□□ -2
IsxA1A546 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.56□□□□□ -2
IsxA1A546 Snora36b-201ENSMUST00000104383 132 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm13329-201ENSMUST00000117063 265 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm13082-201ENSMUST00000118877 561 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms