Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm22194-201ENSMUST00000116869 95 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm15783-201ENSMUST00000117521 633 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm7312-201ENSMUST00000118798 469 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm15026-201ENSMUST00000119219 458 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm11742-201ENSMUST00000119903 233 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm24371-201ENSMUST00000122662 267 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm23829-201ENSMUST00000157392 270 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm22814-201ENSMUST00000157452 104 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm24944-201ENSMUST00000158330 128 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm25749-201ENSMUST00000175485 111 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm6214-201ENSMUST00000178845 541 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm16378-201ENSMUST00000179168 342 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm18956-201ENSMUST00000192857 480 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm44322-201ENSMUST00000196830 115 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm5265-201ENSMUST00000076828 342 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm22571-201ENSMUST00000082984 70 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm26121-201ENSMUST00000083364 162 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.45□□□□□ -1.54
Prpf40aQ9R1C7 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm15037-201ENSMUST00000120358 259 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm25106-201ENSMUST00000122672 134 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm7335-201ENSMUST00000172475 373 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm20630-201ENSMUST00000177387 551 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm27254-201ENSMUST00000183926 517 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm28534-201ENSMUST00000187744 676 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm29330-201ENSMUST00000190032 699 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm43028-201ENSMUST00000202561 481 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm22061-201ENSMUST00000082557 107 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm26329-201ENSMUST00000093723 110 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Mir879-201ENSMUST00000104703 76 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm13787-201ENSMUST00000120422 168 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm13557-201ENSMUST00000120771 382 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm11894-201ENSMUST00000121579 328 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm22328-201ENSMUST00000158074 112 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms