Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.03□□□□□ -1.6
Upf1Q9EPU0 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm14638-201ENSMUST00000121338 216 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm24780-201ENSMUST00000157635 143 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm22840-201ENSMUST00000158444 136 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm16038-201ENSMUST00000159317 193 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm23215-201ENSMUST00000178153 121 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Mir6996-201ENSMUST00000183922 61 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm37050-201ENSMUST00000193464 466 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm44794-201ENSMUST00000206550 411 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm18854-201ENSMUST00000211196 329 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm45252-201ENSMUST00000211579 397 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm24045-201ENSMUST00000083113 98 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf1Q9EPU0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm11576-201ENSMUST00000117433 417 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm15981-201ENSMUST00000119196 457 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm22791-201ENSMUST00000157232 145 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm23326-201ENSMUST00000157419 105 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm26148-201ENSMUST00000157430 68 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm22380-201ENSMUST00000157479 95 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm24847-201ENSMUST00000158032 108 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm2389-201ENSMUST00000160487 189 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm27899-201ENSMUST00000184715 64 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm29104-201ENSMUST00000186304 222 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm43855-201ENSMUST00000197462 507 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm44820-201ENSMUST00000207420 396 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 AC172751.1-201ENSMUST00000226887 440 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Upf1Q9EPU0 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm26300-201ENSMUST00000102282 94 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm15313-201ENSMUST00000119179 282 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm14570-201ENSMUST00000119444 391 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm15986-201ENSMUST00000122153 400 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm26088-201ENSMUST00000157896 131 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm26430-201ENSMUST00000178054 107 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm21978-201ENSMUST00000179696 377 ntBASIC5□□□□□ -1.61
Upf1Q9EPU0 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5□□□□□ -1.61
Upf1Q9EPU0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms