Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm22472-201ENSMUST00000104115 134 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm25728-201ENSMUST00000104525 159 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm13574-201ENSMUST00000120482 394 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm24898-201ENSMUST00000158133 106 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm24224-201ENSMUST00000158828 258 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Cfap61-214ENSMUST00000167179 183 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm24518-201ENSMUST00000180275 94 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm27875-201ENSMUST00000184425 123 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm27286-201ENSMUST00000184934 179 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpusd4Q9CWX4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm13614-201ENSMUST00000117306 503 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm13541-201ENSMUST00000119519 283 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm22536-201ENSMUST00000158171 134 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Mir6963-201ENSMUST00000183535 71 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm45032-201ENSMUST00000205375 520 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm8125-201ENSMUST00000216602 738 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm17829-201ENSMUST00000219782 344 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Gm9616-201ENSMUST00000221154 781 ntBASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Rpusd4Q9CWX4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm381-201ENSMUST00000117443 2037 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm2066-201ENSMUST00000118046 389 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm12191-201ENSMUST00000118307 348 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm13510-201ENSMUST00000118659 429 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm9703-201ENSMUST00000119573 343 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm23886-201ENSMUST00000122684 313 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm25264-201ENSMUST00000158519 117 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm16289-201ENSMUST00000162079 183 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm20689-201ENSMUST00000176033 279 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm8532-201ENSMUST00000179174 461 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm27535-201ENSMUST00000183814 157 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm37601-201ENSMUST00000194922 394 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm42818-201ENSMUST00000198869 987 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm35931-201ENSMUST00000203931 448 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm44030-201ENSMUST00000204865 432 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm44543-201ENSMUST00000209136 396 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm17779-201ENSMUST00000213395 394 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm16419-201ENSMUST00000221057 625 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Gm6988-201ENSMUST00000222676 375 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.58□□□□□ -1.84
Rpusd4Q9CWX4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms