Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TraipQ8VIG6 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.31□□□□□ -1.56
TraipQ8VIG6 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 AC124562.2-201ENSMUST00000223888 2313 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm43404-201ENSMUST00000200424 2534 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Mir701-201ENSMUST00000102208 109 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm24477-201ENSMUST00000157438 103 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm24402-201ENSMUST00000157873 91 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm43814-201ENSMUST00000197851 413 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm45273-201ENSMUST00000211559 281 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.3□□□□□ -1.56
TraipQ8VIG6 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TraipQ8VIG6 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm25537-201ENSMUST00000103851 109 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm24096-201ENSMUST00000103905 110 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm25846-201ENSMUST00000158013 135 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm26501-201ENSMUST00000178307 107 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm44161-201ENSMUST00000203532 253 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm44259-201ENSMUST00000204996 298 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm10237-201ENSMUST00000078393 273 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm25937-201ENSMUST00000083912 107 ntBASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TraipQ8VIG6 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm22778-201ENSMUST00000104090 128 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm23594-201ENSMUST00000104307 134 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm23608-201ENSMUST00000104545 128 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm25111-201ENSMUST00000116686 147 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm22195-201ENSMUST00000116861 108 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm16106-201ENSMUST00000119187 294 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm14940-201ENSMUST00000119309 495 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm13153-201ENSMUST00000120969 637 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm14841-201ENSMUST00000121067 758 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm6265-201ENSMUST00000149263 231 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm26187-201ENSMUST00000157693 101 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm26034-201ENSMUST00000158154 116 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm20673-201ENSMUST00000177167 430 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm27520-201ENSMUST00000184872 81 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm20203-201ENSMUST00000192352 332 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm43559-201ENSMUST00000198755 466 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm43039-201ENSMUST00000202883 963 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm7099-201ENSMUST00000080066 554 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm23721-201ENSMUST00000083005 107 ntBASIC5.28□□□□□ -1.56
TraipQ8VIG6 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TraipQ8VIG6 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TraipQ8VIG6 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TraipQ8VIG6 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 168.6 ms