Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Ushbp1Q8R370 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Ushbp1Q8R370 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm11367-201ENSMUST00000117802 120 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm15399-201ENSMUST00000118055 724 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm14627-201ENSMUST00000118931 567 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm13273-201ENSMUST00000119737 159 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm15014-201ENSMUST00000120742 258 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm12693-201ENSMUST00000121965 483 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm23391-201ENSMUST00000157579 104 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm23112-201ENSMUST00000158606 125 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm24968-201ENSMUST00000179817 107 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Mir6382-201ENSMUST00000184055 110 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm28390-201ENSMUST00000185212 700 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm28654-201ENSMUST00000189801 379 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm38075-201ENSMUST00000191979 920 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm37523-201ENSMUST00000194901 412 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm43472-201ENSMUST00000200175 154 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm29848-201ENSMUST00000203107 295 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm7468-201ENSMUST00000203900 652 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 AL929417.1-201ENSMUST00000214901 124 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm4036-201ENSMUST00000220842 626 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm25079-201ENSMUST00000082529 203 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.52□□□□□ -1.69
Ushbp1Q8R370 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm11859-201ENSMUST00000118099 455 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm13082-201ENSMUST00000118877 561 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm9078-201ENSMUST00000119126 617 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm12837-201ENSMUST00000120131 373 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm14678-201ENSMUST00000121396 482 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm23206-201ENSMUST00000122720 184 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm22597-201ENSMUST00000157602 80 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm25817-201ENSMUST00000177758 121 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm24766-201ENSMUST00000179182 121 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm21638-201ENSMUST00000179473 836 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm27733-201ENSMUST00000184803 68 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Npn2-202ENSMUST00000189275 235 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm7182-201ENSMUST00000193351 732 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm9068-201ENSMUST00000217393 455 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm8231-201ENSMUST00000221617 783 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm22572-201ENSMUST00000082985 105 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm24268-201ENSMUST00000082990 110 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Gm25512-201ENSMUST00000083863 107 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.51□□□□□ -1.69
Ushbp1Q8R370 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Mir690-201ENSMUST00000102110 109 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm24281-201ENSMUST00000104234 136 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm23319-201ENSMUST00000104467 131 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm24318-201ENSMUST00000104490 131 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm14473-201ENSMUST00000122269 557 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm23124-201ENSMUST00000157650 107 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm24553-201ENSMUST00000158653 131 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms