Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28bQ8CEG5 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.27□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28bQ8CEG5 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Ccdc28bQ8CEG5 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm22758-201ENSMUST00000102275 96 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm24273-201ENSMUST00000102332 164 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm12782-201ENSMUST00000117519 727 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm14142-201ENSMUST00000117833 296 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm11268-201ENSMUST00000118347 267 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm14753-201ENSMUST00000118503 246 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm15026-201ENSMUST00000119219 458 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm13717-201ENSMUST00000119868 365 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm14848-201ENSMUST00000121850 467 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm22816-201ENSMUST00000157450 117 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm23568-201ENSMUST00000177960 92 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm24829-201ENSMUST00000179245 92 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm28489-201ENSMUST00000186655 316 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm28615-201ENSMUST00000187527 482 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Trbv22-201ENSMUST00000191697 291 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm44348-201ENSMUST00000200165 122 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm43227-201ENSMUST00000202239 677 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm45209-201ENSMUST00000207122 353 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm18507-201ENSMUST00000218855 525 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm18026-201ENSMUST00000222789 727 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Snord35b-201ENSMUST00000082833 87 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Gm23939-201ENSMUST00000082880 133 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Mir134-201ENSMUST00000083492 71 ntBASIC3.26□□□□□ -1.89
Ccdc28bQ8CEG5 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm22657-201ENSMUST00000104197 132 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm12884-201ENSMUST00000120371 325 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm11438-201ENSMUST00000121582 189 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm22310-201ENSMUST00000157509 116 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm28785-201ENSMUST00000187478 379 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm8023-201ENSMUST00000195298 903 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.25□□□□□ -1.89
Ccdc28bQ8CEG5 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Mir883a-201ENSMUST00000104824 76 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm13728-201ENSMUST00000117471 400 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm15266-201ENSMUST00000119635 255 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm26194-201ENSMUST00000175036 71 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm26988-201ENSMUST00000183296 945 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm27796-201ENSMUST00000183863 261 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm44125-201ENSMUST00000203068 448 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm18597-201ENSMUST00000209519 694 ntBASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc28bQ8CEG5 Gm45796-201ENSMUST00000212483 114 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms