Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm44559-201ENSMUST00000207177 1012 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm46146-201ENSMUST00000217483 346 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 AC158536.1-201ENSMUST00000222510 256 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm24661-201ENSMUST00000083205 104 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm15760-201ENSMUST00000119553 283 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm9225-201ENSMUST00000121921 836 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm16569-201ENSMUST00000160526 314 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm43626-201ENSMUST00000198575 162 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 AC126690.1-201ENSMUST00000228898 397 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm22723-201ENSMUST00000083820 129 ntBASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm44230-201ENSMUST00000203032 3550 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm12814-201ENSMUST00000117091 846 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm16383-201ENSMUST00000118122 232 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm23716-201ENSMUST00000157348 144 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm43494-201ENSMUST00000197672 388 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm44425-201ENSMUST00000203739 429 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm45259-201ENSMUST00000209217 1006 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.76□□□□□ -2.13
Col6a6Q8C6K9 Gm14469-201ENSMUST00000118363 202 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm26171-201ENSMUST00000158422 131 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Mir7678-201ENSMUST00000185076 71 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm43440-201ENSMUST00000201957 729 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 AC164424.1-201ENSMUST00000221690 170 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm2544-201ENSMUST00000222702 756 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm14579-201ENSMUST00000117068 283 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm15399-201ENSMUST00000118055 724 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm25555-201ENSMUST00000158078 111 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm38080-201ENSMUST00000194035 268 ntBASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col6a6Q8C6K9 Gm14292-201ENSMUST00000118761 456 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Snora33-201ENSMUST00000093556 129 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm15714-201ENSMUST00000117168 250 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm28745-201ENSMUST00000190069 305 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm38214-201ENSMUST00000192581 988 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 AC130823.2-201ENSMUST00000226169 290 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm44288-201ENSMUST00000205061 2795 ntBASIC1.74□□□□□ -2.13
Col6a6Q8C6K9 Gm23109-201ENSMUST00000116867 126 ntBASIC1.73□□□□□ -2.13
Col6a6Q8C6K9 Gm23585-201ENSMUST00000157656 102 ntBASIC1.73□□□□□ -2.13
Col6a6Q8C6K9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC1.73□□□□□ -2.13
Col6a6Q8C6K9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.73□□□□□ -2.13
Col6a6Q8C6K9 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms