Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim47Q8C0E3 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.48□□□□□ -1.53
Trim47Q8C0E3 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Mir701-201ENSMUST00000102208 109 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm24117-201ENSMUST00000103973 133 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm15195-201ENSMUST00000118775 263 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm11325-201ENSMUST00000119967 469 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm26291-201ENSMUST00000158889 137 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm24168-201ENSMUST00000178825 107 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Mir195b-201ENSMUST00000184814 97 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm28453-203ENSMUST00000187041 189 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm43524-201ENSMUST00000197278 298 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Mir5121-201ENSMUST00000198528 74 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm44446-201ENSMUST00000204864 255 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm45403-201ENSMUST00000209453 276 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm9795-201ENSMUST00000062156 693 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm26446-201ENSMUST00000082455 103 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm23927-201ENSMUST00000082466 215 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Gm25755-201ENSMUST00000083396 107 ntBASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim47Q8C0E3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim47Q8C0E3 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm15846-201ENSMUST00000116022 320 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm14890-201ENSMUST00000117660 676 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm15002-201ENSMUST00000118406 452 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm6829-201ENSMUST00000119858 360 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm15905-201ENSMUST00000137042 298 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm23557-201ENSMUST00000157820 138 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm26490-201ENSMUST00000157879 140 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm22257-201ENSMUST00000158687 301 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm28849-201ENSMUST00000188127 174 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm28330-201ENSMUST00000190353 171 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Mir7661-201ENSMUST00000197023 61 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm36189-201ENSMUST00000204113 523 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm5045-201ENSMUST00000027054 810 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm22220-201ENSMUST00000082671 149 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm24166-201ENSMUST00000082724 135 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm14914-201ENSMUST00000117576 2031 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.46□□□□□ -1.54
Trim47Q8C0E3 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm6274-201ENSMUST00000118173 797 ntBASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm13867-201ENSMUST00000120844 395 ntBASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm25103-201ENSMUST00000122671 318 ntBASIC5.45□□□□□ -1.54
Trim47Q8C0E3 Gm24060-201ENSMUST00000157494 95 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms