Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir28a-201ENSMUST00000083560 86 ntBASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ubfd1Q78JW9 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm24067-201ENSMUST00000104514 85 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm11576-201ENSMUST00000117433 417 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm14558-201ENSMUST00000117458 381 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm22849-201ENSMUST00000157713 307 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm26335-201ENSMUST00000178449 107 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm29848-201ENSMUST00000203107 295 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm44208-201ENSMUST00000205199 421 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm7675-201ENSMUST00000208828 686 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm5670-201ENSMUST00000093546 372 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ubfd1Q78JW9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm26075-201ENSMUST00000104062 121 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm14765-201ENSMUST00000121954 326 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm24876-201ENSMUST00000158780 92 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm16290-201ENSMUST00000161175 474 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm24464-201ENSMUST00000179697 107 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm28299-201ENSMUST00000189908 339 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm43578-201ENSMUST00000201250 459 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm44099-201ENSMUST00000203299 112 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm8745-201ENSMUST00000207846 782 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm8231-201ENSMUST00000221617 783 ntBASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ubfd1Q78JW9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm26418-201ENSMUST00000104275 137 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm13046-201ENSMUST00000117391 501 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm12149-201ENSMUST00000117511 654 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm14868-201ENSMUST00000117840 216 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm8217-201ENSMUST00000119136 465 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm6584-201ENSMUST00000119671 447 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm11718-201ENSMUST00000119942 537 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm23415-201ENSMUST00000175519 83 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Mir6372-201ENSMUST00000185114 109 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm28390-201ENSMUST00000185212 700 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 Gm29216-201ENSMUST00000187117 492 ntBASIC3.84□□□□□ -1.79
Ubfd1Q78JW9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms