Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Gm44754-201ENSMUST00000208155 400 ntBASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Gm34783-201ENSMUST00000209159 303 ntBASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Rny3-201ENSMUST00000083011 102 ntBASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Usp49Q6P9L4 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm12492-201ENSMUST00000117665 564 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm16005-201ENSMUST00000120515 269 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm23585-201ENSMUST00000157656 102 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm24537-201ENSMUST00000157950 102 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Mir6382-201ENSMUST00000184055 110 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm8151-201ENSMUST00000184817 871 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm8392-201ENSMUST00000185647 835 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm44343-201ENSMUST00000196702 90 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm43007-201ENSMUST00000197618 291 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm45317-201ENSMUST00000210385 223 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm25205-201ENSMUST00000082841 103 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Usp49Q6P9L4 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm14918-201ENSMUST00000118153 268 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm13239-201ENSMUST00000119920 637 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm14687-201ENSMUST00000120206 363 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm12578-201ENSMUST00000121244 417 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm14559-201ENSMUST00000121745 496 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm23463-201ENSMUST00000122468 99 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm23602-201ENSMUST00000157258 132 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm25977-201ENSMUST00000158697 85 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm23473-201ENSMUST00000158883 116 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm8224-201ENSMUST00000166178 497 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Cfap61-214ENSMUST00000167179 183 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Mir5127-201ENSMUST00000175295 71 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm22716-201ENSMUST00000177596 107 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm27161-201ENSMUST00000183960 562 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm27392-201ENSMUST00000185041 101 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm38075-201ENSMUST00000191979 920 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Mir19a-201ENSMUST00000083482 82 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Snord38a-201ENSMUST00000083746 71 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Snord15a-201ENSMUST00000083888 148 ntBASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp49Q6P9L4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Gm13339-201ENSMUST00000120651 510 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.03□□□□□ -1.76
Usp49Q6P9L4 Gm22480-201ENSMUST00000122568 128 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms