Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25555-201ENSMUST00000158078 111 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25956-201ENSMUST00000175115 217 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28860-201ENSMUST00000188103 313 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm5215-201ENSMUST00000054380 405 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22350-201ENSMUST00000083924 156 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25419-201ENSMUST00000104215 191 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Mir743b-201ENSMUST00000104751 77 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm14627-201ENSMUST00000118931 567 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm16232-201ENSMUST00000162856 167 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22114-201ENSMUST00000177756 107 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28957-201ENSMUST00000190174 373 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm6059-201ENSMUST00000196903 340 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm7040-201ENSMUST00000223271 443 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm5670-201ENSMUST00000093546 372 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm14296-202ENSMUST00000108931 750 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm12311-201ENSMUST00000118803 374 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm12852-201ENSMUST00000119478 719 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm23463-201ENSMUST00000122468 99 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm25150-201ENSMUST00000157121 60 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm25278-201ENSMUST00000157267 120 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm24191-201ENSMUST00000157977 122 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm22726-201ENSMUST00000158089 179 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Mir1947-201ENSMUST00000158235 85 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm23402-201ENSMUST00000178130 107 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm26189-201ENSMUST00000179879 107 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Mir6410-201ENSMUST00000184204 104 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm29062-201ENSMUST00000186032 694 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm28255-201ENSMUST00000187101 694 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43304-201ENSMUST00000196803 326 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm32308-201ENSMUST00000203053 280 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm45327-201ENSMUST00000211612 565 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm26497-201ENSMUST00000083146 107 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm25821-201ENSMUST00000093657 133 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Gm8074-201ENSMUST00000095071 252 ntBASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms