Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm44703-201ENSMUST00000205724 248 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm6245-201ENSMUST00000164699 768 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm44458-201ENSMUST00000196594 143 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Mir344-201ENSMUST00000083634 95 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.69□□□□□ -2.14
Col7a1Q63870 Gm17186-201ENSMUST00000171742 456 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm25202-201ENSMUST00000082838 191 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm14652-201ENSMUST00000118479 235 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm12512-201ENSMUST00000119620 217 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm15225-201ENSMUST00000120449 1017 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm14527-201ENSMUST00000179300 639 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Mir6240-201ENSMUST00000184281 117 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC1.68□□□□□ -2.14
Col7a1Q63870 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 AC122484.1-201ENSMUST00000221578 177 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col7a1Q63870 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col7a1Q63870 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.68□□□□□ -2.14
Col7a1Q63870 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col7a1Q63870 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm26421-201ENSMUST00000104279 132 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm7582-201ENSMUST00000160831 603 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm15773-201ENSMUST00000118665 1448 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm11460-201ENSMUST00000118200 361 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm23467-201ENSMUST00000157127 159 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm23716-201ENSMUST00000157348 144 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm24664-201ENSMUST00000158939 100 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm37692-201ENSMUST00000192633 232 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm42990-201ENSMUST00000199231 312 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm17153-201ENSMUST00000171314 490 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Gm44319-201ENSMUST00000196974 93 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col7a1Q63870 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.67□□□□□ -2.14
Col7a1Q63870 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col7a1Q63870 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm24154-201ENSMUST00000175261 130 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Mir1954-201ENSMUST00000175595 86 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.66□□□□□ -2.14
Col7a1Q63870 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm13340-201ENSMUST00000117219 1545 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col7a1Q63870 AC158805.1-201ENSMUST00000218197 2631 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col7a1Q63870 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm24630-201ENSMUST00000122768 106 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm23783-201ENSMUST00000157941 102 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Mir142-201ENSMUST00000198092 64 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Gm42818-201ENSMUST00000198869 987 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.66□□□□□ -2.14
Col7a1Q63870 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.66□□□□□ -2.14
Col7a1Q63870 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Col7a1Q63870 Mir10b-201ENSMUST00000083566 68 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms