Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm37418-201ENSMUST00000195031 274 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm43925-201ENSMUST00000203498 206 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm45006-201ENSMUST00000206078 690 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm44818-201ENSMUST00000206608 358 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm45367-201ENSMUST00000210171 347 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm20304-201ENSMUST00000218168 444 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim28Q62318 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm23851-201ENSMUST00000083831 103 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim28Q62318 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim28Q62318 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm14771-201ENSMUST00000118249 203 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm11625-201ENSMUST00000119535 296 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm14867-201ENSMUST00000120156 866 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm24192-201ENSMUST00000157978 145 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm23257-201ENSMUST00000158322 132 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim28Q62318 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm25451-201ENSMUST00000177832 121 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm27999-201ENSMUST00000183539 193 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm17946-201ENSMUST00000186856 538 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm42621-201ENSMUST00000198114 275 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm45375-201ENSMUST00000210338 280 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm5176-202ENSMUST00000220267 583 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim28Q62318 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim28Q62318 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.8□□□□□ -1.64
Trim28Q62318 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm15025-201ENSMUST00000118434 418 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm11862-201ENSMUST00000119678 659 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm14162-201ENSMUST00000121985 601 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm25781-201ENSMUST00000122527 84 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm23865-201ENSMUST00000157723 97 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm25184-201ENSMUST00000157753 163 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm24729-201ENSMUST00000158225 137 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm16038-201ENSMUST00000159317 193 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm2389-201ENSMUST00000160487 189 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm24810-201ENSMUST00000175317 70 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 Mir7658-201ENSMUST00000184043 57 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm37097-201ENSMUST00000193676 336 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm3933-201ENSMUST00000195391 439 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm5983-201ENSMUST00000197739 770 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm43026-201ENSMUST00000202972 325 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm44824-201ENSMUST00000207021 229 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Gm45387-201ENSMUST00000209792 632 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trim28Q62318 Gm23925-201ENSMUST00000082471 132 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Mir323-201ENSMUST00000083683 86 ntBASIC4.79□□□□□ -1.64
Trim28Q62318 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim28Q62318 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim28Q62318 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim28Q62318 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Trim28Q62318 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim28Q62318 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim28Q62318 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms