Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm19126-201ENSMUST00000207896 509 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm45614-201ENSMUST00000209994 721 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim27Q62158 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim27Q62158 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm9765-201ENSMUST00000043170 321 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Trim27Q62158 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Trim27Q62158 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim27Q62158 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim27Q62158 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim27Q62158 Gm11576-201ENSMUST00000117433 417 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm6071-201ENSMUST00000119561 440 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim27Q62158 Gm24061-201ENSMUST00000157489 120 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Nron-204ENSMUST00000158971 370 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm20672-201ENSMUST00000176605 261 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm25198-201ENSMUST00000178574 110 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm25873-201ENSMUST00000180317 107 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm29104-201ENSMUST00000186304 222 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm28802-201ENSMUST00000188624 944 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm28926-201ENSMUST00000191063 680 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm43932-201ENSMUST00000204499 52 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm29817-201ENSMUST00000210098 172 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim27Q62158 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim27Q62158 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim27Q62158 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim27Q62158 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim27Q62158 Gm25792-201ENSMUST00000083289 100 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Mir193a-201ENSMUST00000083461 66 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.84□□□□□ -1.79
Trim27Q62158 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim27Q62158 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Trim27Q62158 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim27Q62158 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Trim27Q62158 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.84□□□□□ -1.8
Trim27Q62158 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim27Q62158 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm23609-201ENSMUST00000104542 127 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm13046-201ENSMUST00000117391 501 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim27Q62158 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm23415-201ENSMUST00000175519 83 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm19498-201ENSMUST00000191128 331 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm37290-201ENSMUST00000195775 339 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm44513-201ENSMUST00000206811 439 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim27Q62158 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm22265-201ENSMUST00000082947 116 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm16261-201ENSMUST00000096813 205 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim27Q62158 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.83□□□□□ -1.8
Trim27Q62158 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim27Q62158 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim27Q62158 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm23577-201ENSMUST00000103950 110 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm14987-201ENSMUST00000117820 676 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm11577-201ENSMUST00000118030 737 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm11490-201ENSMUST00000118128 272 ntBASIC3.82□□□□□ -1.8
Trim27Q62158 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim27Q62158 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms