Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col11a1Q61245 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.38□□□□□ -2.03
Col11a1Q61245 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.38□□□□□ -2.03
Col11a1Q61245 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col11a1Q61245 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.38□□□□□ -2.03
Col11a1Q61245 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col11a1Q61245 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col11a1Q61245 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Col11a1Q61245 Gm23109-201ENSMUST00000116867 126 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 Gm17177-201ENSMUST00000169144 483 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.37□□□□□ -2.03
Col11a1Q61245 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.37□□□□□ -2.03
Col11a1Q61245 Gm4263-202ENSMUST00000221392 667 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 Gm23623-201ENSMUST00000082461 107 ntBASIC2.37□□□□□ -2.03
Col11a1Q61245 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col11a1Q61245 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col11a1Q61245 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm24900-201ENSMUST00000158128 134 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm38080-201ENSMUST00000194035 268 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm43676-201ENSMUST00000197532 540 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm43494-201ENSMUST00000197672 388 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm18660-201ENSMUST00000199542 629 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm18540-201ENSMUST00000204025 526 ntBASIC2.36□□□□□ -2.03
Col11a1Q61245 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col11a1Q61245 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col11a1Q61245 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
Col11a1Q61245 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm14469-201ENSMUST00000118363 202 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm16510-201ENSMUST00000153501 249 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm23958-201ENSMUST00000157207 105 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm23179-201ENSMUST00000158693 304 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm22716-201ENSMUST00000177596 107 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm27762-201ENSMUST00000183417 109 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col11a1Q61245 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm23599-201ENSMUST00000157261 251 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm25488-201ENSMUST00000158728 118 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm2142-201ENSMUST00000197899 589 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col11a1Q61245 AC105169.1-201ENSMUST00000218912 1294 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.35□□□□□ -2.03
Col11a1Q61245 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm9225-201ENSMUST00000121921 836 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm27468-201ENSMUST00000183577 106 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm18448-201ENSMUST00000186286 599 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Mir1892-201ENSMUST00000197752 80 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm43239-201ENSMUST00000200131 201 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.34□□□□□ -2.03
Col11a1Q61245 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm22723-201ENSMUST00000083820 129 ntBASIC2.34□□□□□ -2.03
Col11a1Q61245 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.34□□□□□ -2.04
Col11a1Q61245 Gm15275-201ENSMUST00000154752 347 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm23716-201ENSMUST00000157348 144 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm6486-201ENSMUST00000166202 434 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm17183-201ENSMUST00000171170 493 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm2691-201ENSMUST00000203205 901 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm7675-201ENSMUST00000208828 686 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm24313-201ENSMUST00000082561 133 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm22304-201ENSMUST00000082688 129 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col11a1Q61245 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm25966-201ENSMUST00000157169 117 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm23342-201ENSMUST00000158958 115 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.33□□□□□ -2.04
Col11a1Q61245 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col11a1Q61245 Gm9251-201ENSMUST00000197202 628 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms