Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usf1Q61069 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 AF357341-201ENSMUST00000083088 75 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Usf1Q61069 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usf1Q61069 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.87□□□□□ -1.95
Usf1Q61069 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Usf1Q61069 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Usf1Q61069 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm15176-201ENSMUST00000117734 135 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm13603-201ENSMUST00000119404 83 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm22849-201ENSMUST00000157713 307 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm23505-201ENSMUST00000158989 130 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm17117-201ENSMUST00000163665 299 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usf1Q61069 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usf1Q61069 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usf1Q61069 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Usf1Q61069 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm6140-201ENSMUST00000192494 966 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm43070-201ENSMUST00000196938 415 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm44320-201ENSMUST00000199276 86 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm6369-201ENSMUST00000069626 412 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm4945-201ENSMUST00000075152 453 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Mir421-201ENSMUST00000083575 76 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.86□□□□□ -1.95
Usf1Q61069 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usf1Q61069 Gm6913-201ENSMUST00000100019 348 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm7429-201ENSMUST00000118664 348 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm9119-201ENSMUST00000118866 495 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm13581-201ENSMUST00000120675 278 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Usf1Q61069 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.85□□□□□ -1.95
Usf1Q61069 Gm25341-201ENSMUST00000157461 268 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm37576-201ENSMUST00000194228 372 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm37817-201ENSMUST00000195276 434 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.85□□□□□ -1.95
Usf1Q61069 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Usf1Q61069 Gm43198-201ENSMUST00000200927 326 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm44688-201ENSMUST00000209083 537 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.85□□□□□ -1.95
Usf1Q61069 Gm17911-201ENSMUST00000210806 877 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm6842-201ENSMUST00000211361 390 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm19709-201ENSMUST00000215403 482 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Usf1Q61069 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Usf1Q61069 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm25126-201ENSMUST00000083343 102 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm23136-201ENSMUST00000083425 99 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Usf1Q61069 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Usf1Q61069 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.85□□□□□ -1.95
Usf1Q61069 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Usf1Q61069 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Usf1Q61069 Gm23577-201ENSMUST00000103950 110 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm25317-201ENSMUST00000116824 129 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm15025-201ENSMUST00000118434 418 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm12372-201ENSMUST00000121654 768 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm23887-201ENSMUST00000122683 172 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.84□□□□□ -1.95
Usf1Q61069 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.84□□□□□ -1.95
Usf1Q61069 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Usf1Q61069 Gm24780-201ENSMUST00000157635 143 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm6374-201ENSMUST00000159051 788 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm20648-201ENSMUST00000175815 328 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm25198-201ENSMUST00000178574 110 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Usf1Q61069 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm42828-201ENSMUST00000199669 469 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm29920-201ENSMUST00000206876 754 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm10297-201ENSMUST00000207136 651 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 Gm45912-201ENSMUST00000210646 543 ntBASIC2.84□□□□□ -1.95
Usf1Q61069 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.84□□□□□ -1.95
Usf1Q61069 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms