Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm27634-201ENSMUST00000175060 126 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm22460-201ENSMUST00000175269 124 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm25535-201ENSMUST00000175364 125 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm24365-201ENSMUST00000175384 125 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm44310-201ENSMUST00000175424 126 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm22639-201ENSMUST00000175591 125 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm24979-201ENSMUST00000178626 126 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm23816-201ENSMUST00000179617 132 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm27520-201ENSMUST00000184872 81 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm27392-201ENSMUST00000185041 101 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm27743-201ENSMUST00000185136 126 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm6060-201ENSMUST00000188671 251 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm29288-201ENSMUST00000191582 901 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm38214-201ENSMUST00000192581 988 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm37097-201ENSMUST00000193676 336 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm44355-201ENSMUST00000200417 104 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm2189-201ENSMUST00000201419 429 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm43227-201ENSMUST00000202239 677 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm43899-201ENSMUST00000203675 246 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm44058-201ENSMUST00000204335 467 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm44399-201ENSMUST00000205043 226 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm12582-201ENSMUST00000030555 697 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm4987-201ENSMUST00000078326 408 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Mir421-201ENSMUST00000083575 76 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Mir542-201ENSMUST00000102186 85 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm24125-201ENSMUST00000104105 137 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm25169-201ENSMUST00000104190 129 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm26423-201ENSMUST00000104277 128 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm22543-201ENSMUST00000104347 94 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm15936-201ENSMUST00000118706 460 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm12335-201ENSMUST00000119738 327 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm14411-201ENSMUST00000121798 914 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm12368-201ENSMUST00000122251 434 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm24840-201ENSMUST00000122603 147 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm22320-201ENSMUST00000157149 312 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm23168-201ENSMUST00000157156 143 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm25391-201ENSMUST00000157342 134 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm24961-201ENSMUST00000157918 184 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm23028-201ENSMUST00000158773 265 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Mir6963-201ENSMUST00000183535 71 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm27582-201ENSMUST00000184084 126 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm8498-201ENSMUST00000188227 974 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm19774-201ENSMUST00000190667 114 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm38075-201ENSMUST00000191979 920 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm37213-201ENSMUST00000193077 586 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm44476-201ENSMUST00000196225 91 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Mir129b-201ENSMUST00000197461 65 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm29920-201ENSMUST00000206876 754 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm44600-201ENSMUST00000208540 111 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm44657-201ENSMUST00000208568 450 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm18414-201ENSMUST00000210858 694 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm19987-201ENSMUST00000216339 499 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm7422-201ENSMUST00000220115 640 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.27□□□□□ -2.05
Trav3-3Q5R1C3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms