Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim41Q5NCC3 Gm45235-201ENSMUST00000208016 4465 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm43188-201ENSMUST00000200180 2160 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm42528-201ENSMUST00000200697 3418 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm6897-201ENSMUST00000117714 138 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm14758-201ENSMUST00000119104 138 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm11430-201ENSMUST00000121317 217 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm25664-201ENSMUST00000157697 107 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Mir6346-201ENSMUST00000183982 81 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm5058-201ENSMUST00000187331 463 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm37343-201ENSMUST00000192542 111 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm42665-201ENSMUST00000202100 586 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm25204-201ENSMUST00000082843 106 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm25755-201ENSMUST00000083396 107 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm10813-201ENSMUST00000099936 90 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm37541-201ENSMUST00000192464 2315 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm43682-201ENSMUST00000202150 2090 ntBASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim41Q5NCC3 Gm25595-201ENSMUST00000102273 97 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Gm24304-201ENSMUST00000177635 107 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Gm28920-201ENSMUST00000189957 699 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Gm46998-201ENSMUST00000221444 330 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 AC154241.1-201ENSMUST00000223952 356 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 AC164883.9-201ENSMUST00000228042 399 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Gm29112-201ENSMUST00000188962 3487 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim41Q5NCC3 Gm45129-201ENSMUST00000208444 2224 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm38069-201ENSMUST00000195360 2144 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm13092-201ENSMUST00000136346 260 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm25914-201ENSMUST00000157618 153 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm8242-202ENSMUST00000193056 475 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm38080-201ENSMUST00000194035 268 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm7449-201ENSMUST00000194393 663 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm44320-201ENSMUST00000199276 86 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm45555-201ENSMUST00000210028 2602 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm44171-201ENSMUST00000203701 2109 ntBASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim41Q5NCC3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.04
Trim41Q5NCC3 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim41Q5NCC3 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim41Q5NCC3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm12226-201ENSMUST00000144172 876 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm24060-201ENSMUST00000157494 95 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm25599-201ENSMUST00000157816 103 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Mir1946a-201ENSMUST00000158360 134 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm23921-201ENSMUST00000175258 107 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm24968-201ENSMUST00000179817 107 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Mir6344-201ENSMUST00000183462 104 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm1833-201ENSMUST00000191608 682 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Mir7661-201ENSMUST00000197023 61 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm44076-201ENSMUST00000203072 520 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm26446-201ENSMUST00000082455 103 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Gm7381-201ENSMUST00000098958 300 ntBASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim41Q5NCC3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms