Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Gm44181-201ENSMUST00000203106 483 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Snora69-201ENSMUST00000083708 131 ntBASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc88bQ4QRL3 Gm24098-201ENSMUST00000102075 109 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm25381-201ENSMUST00000102078 109 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm22416-201ENSMUST00000158590 88 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm26024-201ENSMUST00000158657 322 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm25119-201ENSMUST00000158815 88 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm23967-201ENSMUST00000175062 78 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc88bQ4QRL3 Gm23152-201ENSMUST00000175322 116 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm28974-201ENSMUST00000187893 231 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm7675-201ENSMUST00000208828 686 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm26864-201ENSMUST00000181346 156 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm20776-201ENSMUST00000189940 700 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gm23347-201ENSMUST00000083823 82 ntBASIC3.41□□□□□ -1.86
Ccdc88bQ4QRL3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ccdc88bQ4QRL3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Ccdc88bQ4QRL3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm24857-201ENSMUST00000158061 310 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm23267-201ENSMUST00000178490 132 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm44849-201ENSMUST00000207595 484 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc88bQ4QRL3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Gm22108-201ENSMUST00000177961 106 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Gm24798-201ENSMUST00000179334 106 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Gm37550-201ENSMUST00000193230 463 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Gm25813-201ENSMUST00000082748 191 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 Gm23342-201ENSMUST00000158958 115 ntBASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc88bQ4QRL3 Gm25170-201ENSMUST00000104191 129 ntBASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Trbv22-201ENSMUST00000191697 291 ntBASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Gm30341-201ENSMUST00000194363 289 ntBASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Gm43494-201ENSMUST00000197672 388 ntBASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Mir200b-201ENSMUST00000083615 70 ntBASIC3.37□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Mir7679-201ENSMUST00000183379 63 ntBASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Gm27753-201ENSMUST00000184742 203 ntBASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Gm20304-201ENSMUST00000218168 444 ntBASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm14659-201ENSMUST00000117667 843 ntBASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm4263-202ENSMUST00000221392 667 ntBASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm25106-201ENSMUST00000122672 134 ntBASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc88bQ4QRL3 Gm27668-201ENSMUST00000184188 120 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms