Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm9785-202ENSMUST00000144563 593 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm24291-201ENSMUST00000157633 162 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm22651-201ENSMUST00000157872 94 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm27505-201ENSMUST00000185071 110 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm17937-201ENSMUST00000197908 742 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm5551-201ENSMUST00000199720 690 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm18892-201ENSMUST00000217628 881 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm22072-201ENSMUST00000116850 121 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm11221-201ENSMUST00000117230 597 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm15282-201ENSMUST00000117707 300 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm11356-201ENSMUST00000118974 192 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm22849-201ENSMUST00000157713 307 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm26088-201ENSMUST00000157896 131 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Nron-204ENSMUST00000158971 370 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm24082-201ENSMUST00000175175 83 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm28282-201ENSMUST00000186072 186 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm38076-201ENSMUST00000193889 450 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm43407-201ENSMUST00000199816 317 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm7946-201ENSMUST00000203326 958 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm44526-201ENSMUST00000204664 121 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm45742-201ENSMUST00000212400 433 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm2436-201ENSMUST00000219562 774 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm7422-201ENSMUST00000220115 640 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm22970-201ENSMUST00000083304 186 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.85□□□□□ -1.95
Upf3bQ3ULL6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Mir208b-201ENSMUST00000104735 77 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm11285-201ENSMUST00000118443 322 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm12156-201ENSMUST00000119188 554 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm24773-201ENSMUST00000158513 99 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm27921-201ENSMUST00000183968 108 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Gm32222-201ENSMUST00000203296 298 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.84□□□□□ -1.95
Upf3bQ3ULL6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Upf3bQ3ULL6 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.96
Upf3bQ3ULL6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Upf3bQ3ULL6 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm14469-201ENSMUST00000118363 202 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm14517-201ENSMUST00000119040 337 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm14982-201ENSMUST00000121102 442 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm23886-201ENSMUST00000122684 313 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms