Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm43238-201ENSMUST00000196463 359 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm43804-201ENSMUST00000198280 456 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm29848-201ENSMUST00000203107 295 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm44371-201ENSMUST00000204148 467 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Snord59a-201ENSMUST00000082844 74 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm26300-201ENSMUST00000102282 94 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm12820-201ENSMUST00000119233 342 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm22310-201ENSMUST00000157509 116 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm25846-201ENSMUST00000158013 135 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm23115-201ENSMUST00000158480 108 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm24019-201ENSMUST00000178620 107 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm26243-201ENSMUST00000179260 107 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm27332-201ENSMUST00000184893 112 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm37001-201ENSMUST00000193377 190 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm8747-201ENSMUST00000195392 751 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm42758-201ENSMUST00000202146 283 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm44966-201ENSMUST00000208096 157 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf180Q3U827 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm23296-201ENSMUST00000082555 107 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Gm24859-201ENSMUST00000082729 107 ntBASIC4.79□□□□□ -1.64
Rnf180Q3U827 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf180Q3U827 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm11854-201ENSMUST00000117839 446 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm12053-201ENSMUST00000119022 252 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm11600-201ENSMUST00000119592 240 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm5060-201ENSMUST00000120072 599 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm12515-201ENSMUST00000120116 361 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm14678-201ENSMUST00000121396 482 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm13406-201ENSMUST00000121991 256 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm25606-201ENSMUST00000158363 95 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm25037-201ENSMUST00000175418 110 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm20794-201ENSMUST00000177626 628 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm28141-201ENSMUST00000186676 342 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Npn2-202ENSMUST00000189275 235 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm38044-201ENSMUST00000192964 487 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm44084-201ENSMUST00000203947 409 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm26128-201ENSMUST00000083170 110 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm25480-201ENSMUST00000083217 133 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.78□□□□□ -1.64
Rnf180Q3U827 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.78□□□□□ -1.64
Rnf180Q3U827 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rnf180Q3U827 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms