Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm26396-201ENSMUST00000104093 132 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Mir883a-201ENSMUST00000104824 76 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm12803-201ENSMUST00000118907 821 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm6071-201ENSMUST00000119561 440 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm12095-201ENSMUST00000121962 816 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm26036-201ENSMUST00000158149 144 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm24976-201ENSMUST00000158972 135 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm9722-201ENSMUST00000194568 802 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm44125-201ENSMUST00000203068 448 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm45049-201ENSMUST00000207586 591 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm45375-201ENSMUST00000210338 280 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm7692-201ENSMUST00000213534 409 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Mir193a-201ENSMUST00000083461 66 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col28a1Q2UY11 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm25097-201ENSMUST00000104042 145 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Mir208b-201ENSMUST00000104735 77 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm14001-201ENSMUST00000118847 247 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm2020-201ENSMUST00000145242 579 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm25706-201ENSMUST00000157828 247 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm24534-201ENSMUST00000157949 291 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm23542-201ENSMUST00000158208 96 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm8161-201ENSMUST00000168739 481 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm27660-201ENSMUST00000184028 208 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm27828-201ENSMUST00000184108 119 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm27640-201ENSMUST00000184580 147 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm6501-201ENSMUST00000187178 916 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm28724-202ENSMUST00000194218 295 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm44295-201ENSMUST00000203805 437 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm45048-201ENSMUST00000207058 429 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm44927-201ENSMUST00000207573 716 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm18194-201ENSMUST00000210455 481 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm7380-201ENSMUST00000211599 466 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm8231-201ENSMUST00000221617 783 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm26056-201ENSMUST00000083043 104 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Snord38a-201ENSMUST00000083746 71 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm25410-201ENSMUST00000083758 137 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm23503-201ENSMUST00000083903 107 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm3867-201ENSMUST00000086108 279 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm22365-201ENSMUST00000093750 117 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.72□□□□□ -1.81
Col28a1Q2UY11 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm9059-201ENSMUST00000118319 183 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms