Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.04□□□□□ -1.6
Col6a1Q04857 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm24982-201ENSMUST00000104456 132 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm14774-201ENSMUST00000117857 536 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm12509-201ENSMUST00000118033 609 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm22037-201ENSMUST00000157280 296 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm22816-201ENSMUST00000157450 117 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm23781-201ENSMUST00000157940 308 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm25555-201ENSMUST00000158078 111 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm23704-201ENSMUST00000158844 340 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm5263-201ENSMUST00000163646 601 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.04□□□□□ -1.6
Col6a1Q04857 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm4045-201ENSMUST00000204076 310 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm32536-201ENSMUST00000205209 445 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm45678-201ENSMUST00000210509 295 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.04□□□□□ -1.6
Col6a1Q04857 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm10237-201ENSMUST00000078393 273 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.04□□□□□ -1.6
Col6a1Q04857 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col6a1Q04857 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col6a1Q04857 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col6a1Q04857 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a1Q04857 Mir551b-201ENSMUST00000102165 98 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm13046-201ENSMUST00000117391 501 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm11923-201ENSMUST00000118135 508 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm23743-201ENSMUST00000157389 274 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Mir713-201ENSMUST00000178651 108 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm28399-201ENSMUST00000186221 318 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm21673-201ENSMUST00000186640 436 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm28572-201ENSMUST00000187444 318 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm21135-201ENSMUST00000189023 436 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm29365-201ENSMUST00000189461 699 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm19498-201ENSMUST00000191128 331 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm42830-201ENSMUST00000196642 313 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm6059-201ENSMUST00000196903 340 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Mir129b-201ENSMUST00000197461 65 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm45313-201ENSMUST00000210584 178 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm21937-201ENSMUST00000222825 218 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a1Q04857 Snora23-201ENSMUST00000082517 184 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.03□□□□□ -1.6
Col6a1Q04857 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a1Q04857 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a1Q04857 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a1Q04857 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm24581-201ENSMUST00000103962 133 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm24640-201ENSMUST00000116949 126 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm22626-201ENSMUST00000116990 126 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm15215-201ENSMUST00000117773 489 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm6071-201ENSMUST00000119561 440 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm13511-201ENSMUST00000121167 363 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm23463-201ENSMUST00000122468 99 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm22718-201ENSMUST00000122701 315 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm24761-201ENSMUST00000179589 127 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm24488-201ENSMUST00000179934 127 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm25701-201ENSMUST00000179988 127 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm26431-201ENSMUST00000180199 127 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm26983-201ENSMUST00000182051 388 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm38270-201ENSMUST00000192721 407 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms