Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm25414-201ENSMUST00000101814 107 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm23577-201ENSMUST00000103950 110 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm15988-201ENSMUST00000118677 367 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm13228-201ENSMUST00000118937 634 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm4916-201ENSMUST00000126139 642 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm26100-201ENSMUST00000157245 127 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm23317-201ENSMUST00000157999 129 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm4761-201ENSMUST00000178086 582 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm43224-201ENSMUST00000201567 898 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm32381-201ENSMUST00000203192 476 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Gm24533-201ENSMUST00000083138 196 ntBASIC3.29□□□□□ -1.88
Gabpb1Q00420 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Gabpb1Q00420 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Mir1198-201ENSMUST00000116995 121 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm14622-201ENSMUST00000117117 468 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm12149-201ENSMUST00000117511 654 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm6923-201ENSMUST00000118343 406 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm11943-201ENSMUST00000119473 327 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm23583-201ENSMUST00000158533 289 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm3102-201ENSMUST00000164236 489 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm17054-201ENSMUST00000169811 259 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm23415-201ENSMUST00000175519 83 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm28069-201ENSMUST00000189926 214 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm38075-201ENSMUST00000191979 920 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Gabpb1Q00420 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 AF357341-201ENSMUST00000083088 75 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm24610-201ENSMUST00000083270 109 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm23516-201ENSMUST00000093728 107 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.28□□□□□ -1.88
Gabpb1Q00420 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Gabpb1Q00420 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Gabpb1Q00420 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Gabpb1Q00420 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.89
Gabpb1Q00420 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Gabpb1Q00420 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm11577-201ENSMUST00000118030 737 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm25341-201ENSMUST00000157461 268 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm22722-201ENSMUST00000157467 132 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm26348-201ENSMUST00000157528 240 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm24962-201ENSMUST00000157917 109 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm22833-201ENSMUST00000158292 132 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm26271-201ENSMUST00000158349 104 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm26177-201ENSMUST00000178683 107 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.27□□□□□ -1.89
Gabpb1Q00420 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 167.4 ms