Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm22516-201ENSMUST00000158266 124 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm22765-201ENSMUST00000158371 128 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.69□□□□□ -1.82
CiitaP79621 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm25198-201ENSMUST00000178574 110 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm5527-201ENSMUST00000179821 642 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.69□□□□□ -1.82
CiitaP79621 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm28785-201ENSMUST00000187478 379 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm38075-201ENSMUST00000191979 920 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm19457-201ENSMUST00000200995 448 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm44688-201ENSMUST00000209083 537 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm45658-201ENSMUST00000209197 580 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm39147-201ENSMUST00000211376 465 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm30674-201ENSMUST00000214523 392 ntBASIC3.69□□□□□ -1.82
CiitaP79621 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.69□□□□□ -1.82
CiitaP79621 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.69□□□□□ -1.82
CiitaP79621 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.69□□□□□ -1.82
CiitaP79621 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.69□□□□□ -1.82
CiitaP79621 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.69□□□□□ -1.82
CiitaP79621 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CiitaP79621 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.69□□□□□ -1.82
CiitaP79621 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CiitaP79621 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
CiitaP79621 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CiitaP79621 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CiitaP79621 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CiitaP79621 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Mir582-201ENSMUST00000103758 81 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm23609-201ENSMUST00000104542 127 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm23532-201ENSMUST00000104569 112 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm12149-201ENSMUST00000117511 654 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm11577-201ENSMUST00000118030 737 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm14815-201ENSMUST00000120060 488 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm26020-201ENSMUST00000122729 183 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm23671-201ENSMUST00000157472 103 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
CiitaP79621 Gm27817-201ENSMUST00000184302 233 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.68□□□□□ -1.82
CiitaP79621 Gm37946-201ENSMUST00000192064 347 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm37979-201ENSMUST00000193065 712 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.68□□□□□ -1.82
CiitaP79621 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.68□□□□□ -1.82
CiitaP79621 Gm44125-201ENSMUST00000203068 448 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm34701-202ENSMUST00000204685 360 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm44266-201ENSMUST00000205235 500 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm7624-201ENSMUST00000209702 435 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.68□□□□□ -1.82
CiitaP79621 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.68□□□□□ -1.82
CiitaP79621 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.68□□□□□ -1.82
CiitaP79621 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.68□□□□□ -1.82
CiitaP79621 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.68□□□□□ -1.82
CiitaP79621 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 Gm25404-201ENSMUST00000082970 107 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Snora70-201ENSMUST00000083047 137 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm4017-201ENSMUST00000084813 338 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CiitaP79621 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CiitaP79621 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.68□□□□□ -1.82
CiitaP79621 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CiitaP79621 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CiitaP79621 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.67□□□□□ -1.82
CiitaP79621 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.67□□□□□ -1.82
CiitaP79621 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CiitaP79621 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm14943-201ENSMUST00000118056 546 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm15659-201ENSMUST00000118881 341 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm15177-201ENSMUST00000120491 577 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm24836-201ENSMUST00000122609 108 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
CiitaP79621 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm17377-201ENSMUST00000165184 207 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm3370-201ENSMUST00000171785 500 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.67□□□□□ -1.82
CiitaP79621 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CiitaP79621 Gm8242-202ENSMUST00000193056 475 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.67□□□□□ -1.82
CiitaP79621 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.67□□□□□ -1.82
CiitaP79621 Gm35212-201ENSMUST00000196672 606 ntBASIC3.67□□□□□ -1.82
CiitaP79621 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms