Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm23972-201ENSMUST00000083322 165 ntBASIC4.28□□□□□ -1.72
Sf3b6P59708 Rny1-201ENSMUST00000083767 112 ntBASIC4.28□□□□□ -1.72
Sf3b6P59708 Gm10222-201ENSMUST00000088336 294 ntBASIC4.28□□□□□ -1.72
Sf3b6P59708 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sf3b6P59708 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.28□□□□□ -1.72
Sf3b6P59708 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.28□□□□□ -1.72
Sf3b6P59708 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.28□□□□□ -1.72
Sf3b6P59708 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sf3b6P59708 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Sf3b6P59708 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Mir687-201ENSMUST00000102166 89 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm25419-201ENSMUST00000104215 191 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm6274-201ENSMUST00000118173 797 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm15206-201ENSMUST00000119143 454 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm5123-201ENSMUST00000121905 837 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm5755-201ENSMUST00000152394 837 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm24690-201ENSMUST00000157759 97 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm25906-201ENSMUST00000158489 126 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm25486-201ENSMUST00000158726 63 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm25643-201ENSMUST00000158874 103 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm23415-201ENSMUST00000175519 83 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm24862-201ENSMUST00000179103 79 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm23310-201ENSMUST00000179105 79 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm25461-201ENSMUST00000179293 79 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm19427-201ENSMUST00000183619 208 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm29454-201ENSMUST00000190805 393 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm34176-201ENSMUST00000192621 474 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm37421-201ENSMUST00000193088 132 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm42830-201ENSMUST00000196642 313 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm43724-201ENSMUST00000197516 226 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm43925-201ENSMUST00000203498 206 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm44779-201ENSMUST00000206937 708 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm16419-201ENSMUST00000221057 625 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.27□□□□□ -1.73
Sf3b6P59708 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Sf3b6P59708 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sf3b6P59708 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.27□□□□□ -1.73
Sf3b6P59708 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.26□□□□□ -1.73
Sf3b6P59708 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm23274-201ENSMUST00000104056 130 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm12125-201ENSMUST00000117261 736 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm14537-201ENSMUST00000117464 599 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm15994-201ENSMUST00000118029 402 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm13873-201ENSMUST00000119208 427 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm14940-201ENSMUST00000119309 495 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm25293-201ENSMUST00000122792 285 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm27926-201ENSMUST00000157180 66 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm25341-201ENSMUST00000157461 268 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm23704-201ENSMUST00000158844 340 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.26□□□□□ -1.73
Sf3b6P59708 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm29665-201ENSMUST00000191457 528 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm38053-201ENSMUST00000193938 160 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm44456-201ENSMUST00000196554 89 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm19177-201ENSMUST00000204520 613 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm18306-201ENSMUST00000207338 569 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm18258-201ENSMUST00000210413 542 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm45313-201ENSMUST00000210584 178 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm8940-201ENSMUST00000212585 219 ntBASIC4.26□□□□□ -1.73
Sf3b6P59708 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms