Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.89□□□□□ -1.95
Tpm1P58771 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Tpm1P58771 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Tpm1P58771 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm11708-201ENSMUST00000119530 832 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm15106-201ENSMUST00000119691 821 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm14240-201ENSMUST00000120353 546 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm24240-201ENSMUST00000157785 135 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Tpm1P58771 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm20450-201ENSMUST00000173652 147 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm22252-201ENSMUST00000179316 79 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm37979-201ENSMUST00000193065 712 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm37807-201ENSMUST00000194310 190 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm15235-201ENSMUST00000200572 194 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm44404-201ENSMUST00000203979 636 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Gm45023-201ENSMUST00000207951 379 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.88□□□□□ -1.95
Tpm1P58771 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Tpm1P58771 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm23058-201ENSMUST00000093703 107 ntBASIC2.88□□□□□ -1.95
Tpm1P58771 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Tpm1P58771 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Tpm1P58771 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm25979-201ENSMUST00000157177 138 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm24532-201ENSMUST00000157951 286 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm17655-201ENSMUST00000167969 255 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm17186-201ENSMUST00000171742 456 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm24417-201ENSMUST00000178123 79 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm24653-201ENSMUST00000178541 79 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm25934-201ENSMUST00000178642 79 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm6900-201ENSMUST00000178971 342 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm29045-201ENSMUST00000187278 698 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.87□□□□□ -1.95
Tpm1P58771 Gm9696-202ENSMUST00000191541 830 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Gm43897-201ENSMUST00000204019 309 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Tpm1P58771 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.87□□□□□ -1.95
Tpm1P58771 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Tpm1P58771 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Tpm1P58771 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Tpm1P58771 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Tpm1P58771 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Tpm1P58771 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.86□□□□□ -1.95
Tpm1P58771 Gm13046-201ENSMUST00000117391 501 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm1989-201ENSMUST00000126244 636 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm22794-201ENSMUST00000157228 306 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Tpm1P58771 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Tpm1P58771 Gm7346-201ENSMUST00000169661 476 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm22693-201ENSMUST00000175049 442 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.86□□□□□ -1.95
Tpm1P58771 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.86□□□□□ -1.95
Tpm1P58771 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.86□□□□□ -1.95
Tpm1P58771 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Tpm1P58771 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.86□□□□□ -1.95
Tpm1P58771 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Tpm1P58771 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Tpm1P58771 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
Tpm1P58771 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Tpm1P58771 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm11252-201ENSMUST00000120572 939 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Tpm1P58771 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm23033-201ENSMUST00000157996 134 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 Gm16232-201ENSMUST00000162856 167 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm17166-201ENSMUST00000172006 431 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 Gm24757-201ENSMUST00000176987 371 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm29299-201ENSMUST00000185609 923 ntBASIC2.85□□□□□ -1.95
Tpm1P58771 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Tpm1P58771 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Tpm1P58771 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms