Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Atxn1P54254 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm23532-201ENSMUST00000104569 112 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm13751-201ENSMUST00000120280 752 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm12900-201ENSMUST00000120919 573 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm11645-201ENSMUST00000121589 649 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm7618-201ENSMUST00000121643 171 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm14649-201ENSMUST00000121814 324 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm22521-201ENSMUST00000158272 134 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm22890-201ENSMUST00000158642 144 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Mir6541-201ENSMUST00000183649 110 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm27161-201ENSMUST00000183960 562 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Mir6372-201ENSMUST00000185114 109 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm29104-201ENSMUST00000186304 222 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm31123-201ENSMUST00000192094 666 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.84□□□□□ -1.79
Atxn1P54254 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm43652-201ENSMUST00000196219 675 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm4644-201ENSMUST00000197587 400 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm45400-201ENSMUST00000211603 653 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Gm9068-201ENSMUST00000217393 455 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.84□□□□□ -1.79
Atxn1P54254 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atxn1P54254 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atxn1P54254 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atxn1P54254 Gm7381-201ENSMUST00000098958 300 ntBASIC3.84□□□□□ -1.79
Atxn1P54254 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Atxn1P54254 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Atxn1P54254 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Atxn1P54254 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Atxn1P54254 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Atxn1P54254 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm22023-201ENSMUST00000104354 130 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm22771-201ENSMUST00000104449 91 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm12697-201ENSMUST00000118008 667 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm13478-201ENSMUST00000118312 413 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm12268-201ENSMUST00000118398 442 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm14835-201ENSMUST00000119039 315 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.83□□□□□ -1.8
Atxn1P54254 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm20612-201ENSMUST00000176318 236 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm18185-201ENSMUST00000186725 667 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm42924-201ENSMUST00000197261 185 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm42526-201ENSMUST00000198956 393 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm45173-201ENSMUST00000206819 305 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm7675-201ENSMUST00000208828 686 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.83□□□□□ -1.8
Atxn1P54254 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Atxn1P54254 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atxn1P54254 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Atxn1P54254 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Atxn1P54254 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Atxn1P54254 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm13664-201ENSMUST00000117304 345 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm14751-201ENSMUST00000117693 222 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm14975-201ENSMUST00000118741 664 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm14292-201ENSMUST00000118761 456 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm12770-201ENSMUST00000121734 462 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm26652-202ENSMUST00000181672 475 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.82□□□□□ -1.8
Atxn1P54254 Trbv22-201ENSMUST00000191697 291 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm29950-201ENSMUST00000195273 237 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm18384-201ENSMUST00000195974 808 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.82□□□□□ -1.8
Atxn1P54254 Gm44355-201ENSMUST00000200417 104 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm44266-201ENSMUST00000205235 500 ntBASIC3.82□□□□□ -1.8
Atxn1P54254 Gm36776-201ENSMUST00000207006 203 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms