Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Pdx1P52946 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pdx1P52946 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Pdx1P52946 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.35□□□□□ -1.87
Pdx1P52946 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pdx1P52946 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pdx1P52946 Gm22771-201ENSMUST00000104449 91 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm12492-201ENSMUST00000117665 564 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm14541-201ENSMUST00000118985 157 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm13711-201ENSMUST00000119708 453 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm12118-201ENSMUST00000119766 532 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm14534-201ENSMUST00000120045 357 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm12897-201ENSMUST00000120341 250 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm7071-201ENSMUST00000120458 462 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm13557-201ENSMUST00000120771 382 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm14559-201ENSMUST00000121745 496 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm22208-201ENSMUST00000122658 110 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm15899-201ENSMUST00000128586 238 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.34□□□□□ -1.87
Pdx1P52946 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.34□□□□□ -1.87
Pdx1P52946 Gm23168-201ENSMUST00000157156 143 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm23435-201ENSMUST00000157183 156 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm25835-201ENSMUST00000158917 144 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm24819-201ENSMUST00000175094 166 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Pdx1P52946 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm27919-201ENSMUST00000185163 107 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm18448-201ENSMUST00000186286 599 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm29064-201ENSMUST00000187014 813 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm9722-201ENSMUST00000194568 802 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm38019-201ENSMUST00000195133 380 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.34□□□□□ -1.87
Pdx1P52946 Gm42958-201ENSMUST00000197595 318 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm5034-201ENSMUST00000199115 634 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm31230-201ENSMUST00000199725 785 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.34□□□□□ -1.87
Pdx1P52946 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pdx1P52946 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pdx1P52946 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pdx1P52946 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pdx1P52946 Gm23614-201ENSMUST00000082598 107 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Gm24147-201ENSMUST00000082763 144 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.34□□□□□ -1.87
Pdx1P52946 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pdx1P52946 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Pdx1P52946 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pdx1P52946 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pdx1P52946 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Pdx1P52946 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Pdx1P52946 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Pdx1P52946 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Pdx1P52946 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.34□□□□□ -1.88
Pdx1P52946 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Pdx1P52946 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Pdx1P52946 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm14681-201ENSMUST00000118047 411 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm13122-201ENSMUST00000118380 453 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm14687-201ENSMUST00000120206 363 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm16445-201ENSMUST00000120399 714 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm5646-201ENSMUST00000120568 714 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm14600-201ENSMUST00000121032 630 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm13602-201ENSMUST00000122405 493 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm15914-201ENSMUST00000161922 309 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Pdx1P52946 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Pdx1P52946 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pdx1P52946 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm9379-201ENSMUST00000196790 646 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm42465-201ENSMUST00000197036 492 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm5983-201ENSMUST00000197739 770 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm42621-201ENSMUST00000198114 275 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Gm19457-201ENSMUST00000200995 448 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.33□□□□□ -1.88
Pdx1P52946 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm46234-201ENSMUST00000218702 259 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.33□□□□□ -1.88
Pdx1P52946 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Pdx1P52946 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pdx1P52946 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms