Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm17154-201ENSMUST00000165748 431 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm20415-201ENSMUST00000172877 423 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm20534-201ENSMUST00000172957 172 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.8□□□□□ -1.8
Traf1P39428 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.8□□□□□ -1.8
Traf1P39428 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Traf1P39428 Gm43115-201ENSMUST00000196244 160 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm9379-201ENSMUST00000196790 646 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm43899-201ENSMUST00000203675 246 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Traf1P39428 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.8□□□□□ -1.8
Traf1P39428 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm9845-201ENSMUST00000056409 598 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Traf1P39428 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Gm4017-201ENSMUST00000084813 338 ntBASIC3.8□□□□□ -1.8
Traf1P39428 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Traf1P39428 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Traf1P39428 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Traf1P39428 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Traf1P39428 Gm13803-201ENSMUST00000117547 489 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm13640-201ENSMUST00000118445 264 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm12954-201ENSMUST00000118610 611 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Traf1P39428 Gm13239-201ENSMUST00000119920 637 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm12706-201ENSMUST00000121588 698 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm27163-201ENSMUST00000184767 409 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.79□□□□□ -1.8
Traf1P39428 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.79□□□□□ -1.8
Traf1P39428 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.79□□□□□ -1.8
Traf1P39428 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Traf1P39428 Gm18892-201ENSMUST00000217628 881 ntBASIC3.79□□□□□ -1.8
Traf1P39428 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.79□□□□□ -1.8
Traf1P39428 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.79□□□□□ -1.8
Traf1P39428 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.79□□□□□ -1.8
Traf1P39428 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Traf1P39428 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.79□□□□□ -1.8
Traf1P39428 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Traf1P39428 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Traf1P39428 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Traf1P39428 Gm22023-201ENSMUST00000104354 130 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm13692-201ENSMUST00000120774 371 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm14129-201ENSMUST00000122436 291 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm23777-201ENSMUST00000158994 259 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm10075-201ENSMUST00000162030 545 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm24819-201ENSMUST00000175094 166 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm20672-201ENSMUST00000176605 261 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm23860-201ENSMUST00000179446 132 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm29045-201ENSMUST00000187278 698 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm18384-201ENSMUST00000195974 808 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.78□□□□□ -1.8
Traf1P39428 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Traf1P39428 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Traf1P39428 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.78□□□□□ -1.8
Traf1P39428 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Traf1P39428 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Traf1P39428 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Traf1P39428 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm23577-201ENSMUST00000103950 110 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm25308-201ENSMUST00000104171 158 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm15399-201ENSMUST00000118055 724 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm14794-201ENSMUST00000118181 192 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm26991-201ENSMUST00000180950 620 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm32340-201ENSMUST00000192883 259 ntBASIC3.77□□□□□ -1.81
Traf1P39428 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm45382-201ENSMUST00000210607 151 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm46136-201ENSMUST00000214730 565 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.77□□□□□ -1.81
Traf1P39428 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.77□□□□□ -1.81
Traf1P39428 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Traf1P39428 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Traf1P39428 Gm24446-201ENSMUST00000083982 156 ntBASIC3.77□□□□□ -1.81
Traf1P39428 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Traf1P39428 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.77□□□□□ -1.81
Traf1P39428 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm26423-201ENSMUST00000104277 128 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Mir466n-201ENSMUST00000104798 94 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm7123-201ENSMUST00000117647 213 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm14901-201ENSMUST00000119001 283 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm13574-201ENSMUST00000120482 394 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm15190-201ENSMUST00000120855 276 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm4916-201ENSMUST00000126139 642 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm23053-201ENSMUST00000175136 96 ntBASIC3.76□□□□□ -1.81
Traf1P39428 Gm27599-201ENSMUST00000183758 174 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms