Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm44472-201ENSMUST00000204922 943 ntBASIC4.53□□□□□ -1.68
Usp4P35123 Gm44655-201ENSMUST00000207768 423 ntBASIC4.53□□□□□ -1.68
Usp4P35123 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp4P35123 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.53□□□□□ -1.68
Usp4P35123 Gm45735-201ENSMUST00000212779 319 ntBASIC4.53□□□□□ -1.68
Usp4P35123 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.53□□□□□ -1.68
Usp4P35123 Gm5670-201ENSMUST00000093546 372 ntBASIC4.53□□□□□ -1.68
Usp4P35123 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp4P35123 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp4P35123 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp4P35123 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp4P35123 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp4P35123 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp4P35123 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp4P35123 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Usp4P35123 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Usp4P35123 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Usp4P35123 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm22472-201ENSMUST00000104115 134 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm11556-201ENSMUST00000120751 288 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.52□□□□□ -1.69
Usp4P35123 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Gm24784-201ENSMUST00000157640 62 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm24240-201ENSMUST00000157785 135 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm24713-201ENSMUST00000178850 107 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Gm25448-201ENSMUST00000180065 107 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm21088-201ENSMUST00000190875 316 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm44055-201ENSMUST00000204376 247 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Gm19126-201ENSMUST00000207896 509 ntBASIC4.52□□□□□ -1.69
Usp4P35123 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.52□□□□□ -1.69
Usp4P35123 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.52□□□□□ -1.69
Usp4P35123 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.52□□□□□ -1.69
Usp4P35123 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Usp4P35123 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Usp4P35123 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Usp4P35123 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.52□□□□□ -1.69
Usp4P35123 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp4P35123 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Usp4P35123 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Gm13664-201ENSMUST00000117304 345 ntBASIC4.51□□□□□ -1.69
Usp4P35123 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Gm24504-201ENSMUST00000157679 100 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm23411-201ENSMUST00000157988 62 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm22395-201ENSMUST00000177427 96 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm27805-201ENSMUST00000184513 79 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.51□□□□□ -1.69
Usp4P35123 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm45614-201ENSMUST00000209994 721 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm23679-201ENSMUST00000083161 119 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Gm25141-201ENSMUST00000083177 107 ntBASIC4.51□□□□□ -1.69
Usp4P35123 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Usp4P35123 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp4P35123 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Neat1-201ENSMUST00000173672 20771 ntBASIC4.51□□□□□ -1.69
Usp4P35123 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.51□□□□□ -1.69
Usp4P35123 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Usp4P35123 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Usp4P35123 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Usp4P35123 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.5□□□□□ -1.69
Usp4P35123 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Usp4P35123 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Usp4P35123 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Usp4P35123 Gm12719-201ENSMUST00000118859 241 ntBASIC4.5□□□□□ -1.69
Usp4P35123 Gm13717-201ENSMUST00000119868 365 ntBASIC4.5□□□□□ -1.69
Usp4P35123 Gm14649-201ENSMUST00000121814 324 ntBASIC4.5□□□□□ -1.69
Usp4P35123 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Usp4P35123 Gm24780-201ENSMUST00000157635 143 ntBASIC4.5□□□□□ -1.69
Usp4P35123 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Usp4P35123 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Usp4P35123 Gm24518-201ENSMUST00000180275 94 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms