Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23799-201ENSMUST00000175559 120 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm27428-201ENSMUST00000184289 110 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm27330-201ENSMUST00000184689 132 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm18448-201ENSMUST00000186286 599 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm29597-201ENSMUST00000188035 308 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm37692-201ENSMUST00000192633 232 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm37791-201ENSMUST00000195081 286 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm42958-201ENSMUST00000197595 318 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm19457-201ENSMUST00000200995 448 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.47□□□□□ -2.01
Sdc1P18828 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm35558-202ENSMUST00000221819 499 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm10704-201ENSMUST00000098952 730 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sdc1P18828 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
Sdc1P18828 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Sdc1P18828 Gm25213-201ENSMUST00000102388 113 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Sdc1P18828 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.46□□□□□ -2.02
Sdc1P18828 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm11506-201ENSMUST00000122414 470 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm23602-201ENSMUST00000157258 132 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22560-201ENSMUST00000157332 120 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22722-201ENSMUST00000157467 132 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm24959-201ENSMUST00000157924 146 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22211-201ENSMUST00000158097 156 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22833-201ENSMUST00000158292 132 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22416-201ENSMUST00000158590 88 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm23819-201ENSMUST00000158744 109 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm25119-201ENSMUST00000158815 88 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm21893-201ENSMUST00000179119 397 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Mir6338-201ENSMUST00000183389 109 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm27470-201ENSMUST00000184070 210 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm6060-201ENSMUST00000188671 251 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm7299-201ENSMUST00000194441 581 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm42621-201ENSMUST00000198114 275 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm17951-201ENSMUST00000198536 496 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm43384-201ENSMUST00000200569 637 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm45209-201ENSMUST00000207122 353 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm45438-201ENSMUST00000210242 564 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm18414-201ENSMUST00000210858 694 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm45400-201ENSMUST00000211603 653 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm45439-201ENSMUST00000211723 359 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm18252-203ENSMUST00000215855 757 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.46□□□□□ -2.02
Sdc1P18828 Gm22740-201ENSMUST00000083439 109 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Gm23847-201ENSMUST00000083829 110 ntBASIC2.46□□□□□ -2.02
Sdc1P18828 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Sdc1P18828 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Sdc1P18828 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Sdc1P18828 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sdc1P18828 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sdc1P18828 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Sdc1P18828 Mir193b-201ENSMUST00000103784 79 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22269-201ENSMUST00000104002 130 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22493-201ENSMUST00000104494 132 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm14020-201ENSMUST00000118165 662 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm12876-201ENSMUST00000120975 408 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm11430-201ENSMUST00000121317 217 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22816-201ENSMUST00000157450 117 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm26348-201ENSMUST00000157528 240 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm27592-201ENSMUST00000157729 126 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22186-201ENSMUST00000157822 122 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm25605-201ENSMUST00000158364 124 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm23409-201ENSMUST00000158516 237 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Mir5129-201ENSMUST00000174938 78 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22174-201ENSMUST00000175050 125 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22692-201ENSMUST00000175055 125 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm27634-201ENSMUST00000175060 126 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22460-201ENSMUST00000175269 124 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm25535-201ENSMUST00000175364 125 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm24365-201ENSMUST00000175384 125 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm44310-201ENSMUST00000175424 126 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm26061-201ENSMUST00000175584 108 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm22639-201ENSMUST00000175591 125 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm24979-201ENSMUST00000178626 126 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Mir7031-201ENSMUST00000183860 65 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm27743-201ENSMUST00000185136 126 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm8296-201ENSMUST00000185597 524 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 Gm29602-201ENSMUST00000186887 442 ntBASIC2.45□□□□□ -2.02
Sdc1P18828 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms