Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22174-201ENSMUST00000175050 125 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm22692-201ENSMUST00000175055 125 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm27634-201ENSMUST00000175060 126 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm22460-201ENSMUST00000175269 124 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm24365-201ENSMUST00000175384 125 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm44310-201ENSMUST00000175424 126 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm22639-201ENSMUST00000175591 125 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm24979-201ENSMUST00000178626 126 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Mir6371-201ENSMUST00000184470 111 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm27743-201ENSMUST00000185136 126 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm28591-201ENSMUST00000185259 183 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm32340-201ENSMUST00000192883 259 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdx1P18111 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdx1P18111 Gm43217-201ENSMUST00000199513 367 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm36776-201ENSMUST00000207006 203 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm45048-201ENSMUST00000207058 429 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm18338-201ENSMUST00000222381 560 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx1P18111 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx1P18111 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx1P18111 Gm2710-201ENSMUST00000073196 603 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx1P18111 Gm23297-201ENSMUST00000083184 127 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Gm23452-201ENSMUST00000083327 107 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx1P18111 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdx1P18111 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdx1P18111 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.6□□□□□ -1.99
Cdx1P18111 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm25526-201ENSMUST00000104332 132 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
Cdx1P18111 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm24925-201ENSMUST00000178157 107 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm27869-201ENSMUST00000184327 122 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Mir6993-201ENSMUST00000184912 65 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm27249-201ENSMUST00000185049 328 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm18448-201ENSMUST00000186286 599 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm28779-201ENSMUST00000189678 323 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm43355-201ENSMUST00000196541 346 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm45614-201ENSMUST00000209994 721 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm45530-201ENSMUST00000211658 225 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Gm18026-201ENSMUST00000222789 727 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cdx1P18111 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdx1P18111 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdx1P18111 Gm25403-201ENSMUST00000082971 143 ntBASIC2.59□□□□□ -1.99
Cdx1P18111 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
Cdx1P18111 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Cdx1P18111 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cdx1P18111 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.58□□□□□ -2
Cdx1P18111 Gm23530-201ENSMUST00000104564 137 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm13167-201ENSMUST00000118554 578 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm12889-201ENSMUST00000118684 241 ntBASIC2.58□□□□□ -2
Cdx1P18111 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm24959-201ENSMUST00000157924 146 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm3470-201ENSMUST00000160819 420 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm20698-201ENSMUST00000175657 233 ntBASIC2.58□□□□□ -2
Cdx1P18111 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.58□□□□□ -2
Cdx1P18111 Mir6372-201ENSMUST00000185114 109 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm6651-201ENSMUST00000189471 271 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm29192-201ENSMUST00000190942 377 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm6680-201ENSMUST00000192789 950 ntBASIC2.58□□□□□ -2
Cdx1P18111 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.58□□□□□ -2
Cdx1P18111 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cdx1P18111 Gm44208-201ENSMUST00000205199 421 ntBASIC2.58□□□□□ -2
Cdx1P18111 Gm44657-201ENSMUST00000208568 450 ntBASIC2.58□□□□□ -2
Cdx1P18111 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdx1P18111 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdx1P18111 Gm46233-201ENSMUST00000217831 449 ntBASIC2.58□□□□□ -2
Cdx1P18111 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.58□□□□□ -2
Cdx1P18111 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.58□□□□□ -2
Cdx1P18111 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdx1P18111 Platr25-208ENSMUST00000222602 939 ntBASIC2.58□□□□□ -2
Cdx1P18111 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.58□□□□□ -2
Cdx1P18111 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.58□□□□□ -2
Cdx1P18111 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdx1P18111 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.58□□□□□ -2
Cdx1P18111 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx1P18111 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms