Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm19206-201ENSMUST00000186401 827 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm43304-201ENSMUST00000196803 326 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RaraP11416 Gm17811-201ENSMUST00000206193 387 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm44816-201ENSMUST00000206666 477 ntBASIC5.06□□□□□ -1.6
RaraP11416 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.06□□□□□ -1.6
RaraP11416 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.06□□□□□ -1.6
RaraP11416 AC133598.3-201ENSMUST00000224322 568 ntBASIC5.06□□□□□ -1.6
RaraP11416 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.06□□□□□ -1.6
RaraP11416 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RaraP11416 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm22973-201ENSMUST00000083298 191 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm22974-201ENSMUST00000083301 103 ntBASIC5.06□□□□□ -1.6
RaraP11416 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RaraP11416 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.06□□□□□ -1.6
RaraP11416 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.06□□□□□ -1.6
RaraP11416 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RaraP11416 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RaraP11416 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.06□□□□□ -1.6
RaraP11416 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RaraP11416 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RaraP11416 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.05□□□□□ -1.6
RaraP11416 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RaraP11416 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RaraP11416 Gm12760-201ENSMUST00000117861 482 ntBASIC5.05□□□□□ -1.6
RaraP11416 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm12647-201ENSMUST00000118977 265 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm14861-201ENSMUST00000119451 455 ntBASIC5.05□□□□□ -1.6
RaraP11416 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm5391-201ENSMUST00000121155 613 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm13232-201ENSMUST00000121816 632 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RaraP11416 Gm22598-201ENSMUST00000157600 127 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm6374-201ENSMUST00000159051 788 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm5258-201ENSMUST00000165437 327 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm17152-201ENSMUST00000172430 535 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm29454-201ENSMUST00000190805 393 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm37801-201ENSMUST00000194754 274 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm38060-201ENSMUST00000194822 464 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Gm44879-201ENSMUST00000207007 503 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.05□□□□□ -1.6
RaraP11416 Gm18320-201ENSMUST00000211304 595 ntBASIC5.05□□□□□ -1.6
RaraP11416 Gm40692-201ENSMUST00000220411 491 ntBASIC5.05□□□□□ -1.6
RaraP11416 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.05□□□□□ -1.6
RaraP11416 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RaraP11416 Gm10916-201ENSMUST00000080330 483 ntBASIC5.05□□□□□ -1.6
RaraP11416 Snora52-201ENSMUST00000082732 137 ntBASIC5.05□□□□□ -1.6
RaraP11416 Snord47-201ENSMUST00000083034 77 ntBASIC5.05□□□□□ -1.6
RaraP11416 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RaraP11416 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
RaraP11416 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.05□□□□□ -1.6
RaraP11416 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RaraP11416 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RaraP11416 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.04□□□□□ -1.6
RaraP11416 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RaraP11416 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RaraP11416 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RaraP11416 Gm3267-201ENSMUST00000118671 473 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm15026-201ENSMUST00000119219 458 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm4916-201ENSMUST00000126139 642 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm23000-201ENSMUST00000157083 139 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm26149-201ENSMUST00000157432 108 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm17119-201ENSMUST00000163943 280 ntBASIC5.04□□□□□ -1.6
RaraP11416 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm26828-201ENSMUST00000180640 172 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm26701-201ENSMUST00000181571 234 ntBASIC5.04□□□□□ -1.6
RaraP11416 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.04□□□□□ -1.6
RaraP11416 Gm8242-202ENSMUST00000193056 475 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.04□□□□□ -1.6
RaraP11416 Gm42453-201ENSMUST00000200477 409 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm8319-201ENSMUST00000205708 641 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm7726-201ENSMUST00000206241 231 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm3816-201ENSMUST00000209803 433 ntBASIC5.04□□□□□ -1.6
RaraP11416 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.04□□□□□ -1.6
RaraP11416 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RaraP11416 Gm4987-201ENSMUST00000078326 408 ntBASIC5.04□□□□□ -1.6
RaraP11416 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RaraP11416 Gm22358-201ENSMUST00000082877 122 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gm25188-201ENSMUST00000083913 122 ntBASIC5.04□□□□□ -1.6
RaraP11416 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RaraP11416 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.04□□□□□ -1.6
RaraP11416 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.04□□□□□ -1.6
RaraP11416 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RaraP11416 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RaraP11416 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RaraP11416 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RaraP11416 Gm23142-201ENSMUST00000101848 105 ntBASIC5.03□□□□□ -1.6
RaraP11416 Gm26240-201ENSMUST00000101893 105 ntBASIC5.03□□□□□ -1.6
RaraP11416 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
RaraP11416 Gm23577-201ENSMUST00000103950 110 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms