Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.47□□□□□ -2.01
Col1a1P11087 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.47□□□□□ -2.01
Col1a1P11087 Gm42824-201ENSMUST00000199361 247 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Gm44845-201ENSMUST00000208773 335 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Gm30674-201ENSMUST00000214523 392 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col1a1P11087 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col1a1P11087 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Col1a1P11087 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col1a1P11087 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col1a1P11087 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col1a1P11087 Gm16328-201ENSMUST00000126985 196 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Gm22891-201ENSMUST00000158641 164 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Gm8224-201ENSMUST00000166178 497 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col1a1P11087 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.46□□□□□ -2.02
Col1a1P11087 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.46□□□□□ -2.02
Col1a1P11087 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col1a1P11087 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Col1a1P11087 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Col1a1P11087 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col1a1P11087 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm15162-201ENSMUST00000119325 283 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm11350-201ENSMUST00000121436 870 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm14559-201ENSMUST00000121745 496 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.45□□□□□ -2.02
Col1a1P11087 Gm26280-201ENSMUST00000157096 101 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm24478-201ENSMUST00000157439 158 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Col1a1P11087 Mir7039-201ENSMUST00000183852 85 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col1a1P11087 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col1a1P11087 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Col1a1P11087 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col1a1P11087 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm24076-201ENSMUST00000158179 94 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm22416-201ENSMUST00000158590 88 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm25119-201ENSMUST00000158815 88 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm16326-201ENSMUST00000162843 414 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm23714-201ENSMUST00000179259 105 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm29281-201ENSMUST00000188077 381 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm29657-201ENSMUST00000189807 342 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Col1a1P11087 AC124356.2-201ENSMUST00000221874 336 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm24313-201ENSMUST00000082561 133 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.45□□□□□ -2.02
Col1a1P11087 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col1a1P11087 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Col1a1P11087 Gm15844-201ENSMUST00000118016 576 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Gm14939-201ENSMUST00000120347 680 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Gm23642-201ENSMUST00000157858 258 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Gm24811-201ENSMUST00000175313 100 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.44□□□□□ -2.02
Col1a1P11087 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.44□□□□□ -2.02
Col1a1P11087 Gm19057-201ENSMUST00000194329 1197 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Gm30341-201ENSMUST00000194363 289 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Gm43722-201ENSMUST00000196054 124 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col1a1P11087 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col1a1P11087 Gm22978-201ENSMUST00000082607 160 ntBASIC2.44□□□□□ -2.02
Col1a1P11087 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Col1a1P11087 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col1a1P11087 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col1a1P11087 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col1a1P11087 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col1a1P11087 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col1a1P11087 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col1a1P11087 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col1a1P11087 Gm26004-201ENSMUST00000158804 116 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Mir6353-201ENSMUST00000183596 113 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Mir6352-201ENSMUST00000184495 116 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Gm37162-201ENSMUST00000191708 551 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.43□□□□□ -2.02
Col1a1P11087 Gm43901-201ENSMUST00000203247 453 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col1a1P11087 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col1a1P11087 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col1a1P11087 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col1a1P11087 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col1a1P11087 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col1a1P11087 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.43□□□□□ -2.02
Col1a1P11087 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col1a1P11087 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col1a1P11087 Gm13627-201ENSMUST00000119700 706 ntBASIC2.42□□□□□ -2.02
Col1a1P11087 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.42□□□□□ -2.02
Col1a1P11087 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.42□□□□□ -2.02
Col1a1P11087 Gm16510-201ENSMUST00000153501 249 ntBASIC2.42□□□□□ -2.02
Col1a1P11087 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col1a1P11087 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.42□□□□□ -2.02
Col1a1P11087 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms