Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm22936-201ENSMUST00000103955 126 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm25758-201ENSMUST00000103987 129 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm23593-201ENSMUST00000104309 120 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm13321-201ENSMUST00000117101 400 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm11270-201ENSMUST00000117685 471 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm14922-201ENSMUST00000121131 163 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm12110-201ENSMUST00000121601 579 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.25□□□□□ -1.73
Hoxd3P09027 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm25115-201ENSMUST00000157187 140 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm21991-201ENSMUST00000180006 508 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm29429-201ENSMUST00000187071 121 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm28429-201ENSMUST00000188521 363 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm29489-201ENSMUST00000188934 324 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm19901-201ENSMUST00000192191 495 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Snord80-202ENSMUST00000199023 77 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Mir337-201ENSMUST00000083592 97 ntBASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Hoxd3P09027 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hoxd3P09027 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd3P09027 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm14874-201ENSMUST00000118995 438 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm11785-201ENSMUST00000120165 601 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm15926-201ENSMUST00000120492 550 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm24839-201ENSMUST00000122602 107 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.24□□□□□ -1.73
Hoxd3P09027 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm24295-201ENSMUST00000158298 131 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm22767-201ENSMUST00000158365 165 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm21960-201ENSMUST00000181924 452 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29320-201ENSMUST00000185235 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28339-201ENSMUST00000185845 696 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28471-201ENSMUST00000185994 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29179-202ENSMUST00000186138 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28598-201ENSMUST00000186490 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28057-201ENSMUST00000186603 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29448-201ENSMUST00000186675 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29314-201ENSMUST00000186800 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28253-202ENSMUST00000187971 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28468-201ENSMUST00000188536 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm28896-201ENSMUST00000188609 696 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29268-201ENSMUST00000188669 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29169-201ENSMUST00000189835 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm37172-201ENSMUST00000191926 615 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm38107-201ENSMUST00000194873 696 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm43978-201ENSMUST00000203491 451 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm29781-201ENSMUST00000203862 478 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.24□□□□□ -1.73
Hoxd3P09027 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Hoxd3P09027 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Mir146-201ENSMUST00000083667 65 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.24□□□□□ -1.73
Hoxd3P09027 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms