Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm27999-201ENSMUST00000183539 193 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm28654-201ENSMUST00000189801 379 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Hcn1O88704 Gm36966-201ENSMUST00000192217 413 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm37692-201ENSMUST00000192633 232 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hcn1O88704 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.35□□□□□ -1.87
Hcn1O88704 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm19219-201ENSMUST00000215863 724 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hcn1O88704 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.35□□□□□ -1.87
Hcn1O88704 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.35□□□□□ -1.87
Hcn1O88704 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.35□□□□□ -1.87
Hcn1O88704 Gm46994-201ENSMUST00000221523 219 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm5955-201ENSMUST00000222712 219 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm9818-201ENSMUST00000050900 255 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hcn1O88704 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hcn1O88704 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Hcn1O88704 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.35□□□□□ -1.87
Hcn1O88704 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hcn1O88704 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hcn1O88704 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm25563-201ENSMUST00000104603 74 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm14975-201ENSMUST00000118741 664 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm15026-201ENSMUST00000119219 458 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm11352-201ENSMUST00000119264 517 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm12578-201ENSMUST00000121244 417 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm22320-201ENSMUST00000157149 312 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm23602-201ENSMUST00000157258 132 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm22733-201ENSMUST00000158094 91 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm9593-201ENSMUST00000166034 469 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Mir7047-201ENSMUST00000184595 64 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm28146-201ENSMUST00000185517 701 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm19637-201ENSMUST00000185933 579 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm29576-201ENSMUST00000188020 678 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm28474-201ENSMUST00000188501 315 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm28354-201ENSMUST00000190904 678 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm43814-201ENSMUST00000197851 413 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm44294-201ENSMUST00000205090 728 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm44703-201ENSMUST00000205724 248 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm45327-201ENSMUST00000211612 565 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.34□□□□□ -1.87
Hcn1O88704 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm23736-201ENSMUST00000082553 75 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm4017-201ENSMUST00000084813 338 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.34□□□□□ -1.87
Hcn1O88704 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hcn1O88704 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.34□□□□□ -1.88
Hcn1O88704 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.34□□□□□ -1.88
Hcn1O88704 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.34□□□□□ -1.88
Hcn1O88704 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Hcn1O88704 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm25088-201ENSMUST00000101803 79 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm14292-201ENSMUST00000118761 456 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm15799-201ENSMUST00000120899 289 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm26393-201ENSMUST00000157625 129 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm23352-201ENSMUST00000158428 64 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Nron-204ENSMUST00000158971 370 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm28356-202ENSMUST00000187566 858 ntBASIC3.33□□□□□ -1.88
Hcn1O88704 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hcn1O88704 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.33□□□□□ -1.88
Hcn1O88704 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms