Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm6797-201ENSMUST00000119440 512 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm14570-201ENSMUST00000119444 391 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm12335-201ENSMUST00000119738 327 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm13751-201ENSMUST00000120280 752 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm14739-201ENSMUST00000120424 802 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm24438-201ENSMUST00000157893 115 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm4222-201ENSMUST00000165784 470 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm44016-201ENSMUST00000203463 164 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm2059-201ENSMUST00000212025 287 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm8942-201ENSMUST00000217892 400 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm8231-201ENSMUST00000221617 783 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm22245-201ENSMUST00000082479 103 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm23503-201ENSMUST00000083903 107 ntBASIC3.14□□□□□ -1.91
Trav13d-3J3QMG8 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm23256-201ENSMUST00000102235 110 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm26140-201ENSMUST00000103807 110 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm24096-201ENSMUST00000103905 110 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm25773-201ENSMUST00000116718 127 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14594-201ENSMUST00000118052 537 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm15268-201ENSMUST00000118845 352 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14359-201ENSMUST00000118883 424 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14590-201ENSMUST00000118934 537 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm8217-201ENSMUST00000119136 465 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14656-201ENSMUST00000120342 502 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm9498-201ENSMUST00000140849 291 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm5958-201ENSMUST00000147698 297 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm23981-201ENSMUST00000157136 106 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm25621-201ENSMUST00000157223 114 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm22310-201ENSMUST00000157509 116 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm22840-201ENSMUST00000158444 136 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm22908-201ENSMUST00000177620 110 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14596-201ENSMUST00000180268 537 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm14595-201ENSMUST00000180335 537 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Mir7028-201ENSMUST00000185016 64 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm28339-201ENSMUST00000185845 696 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm29062-201ENSMUST00000186032 694 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm28057-201ENSMUST00000186603 615 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm18185-201ENSMUST00000186725 667 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm29576-201ENSMUST00000188020 678 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm28896-201ENSMUST00000188609 696 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm29545-201ENSMUST00000188878 694 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm28354-201ENSMUST00000190904 678 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Trbv22-201ENSMUST00000191697 291 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm37433-201ENSMUST00000192695 678 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Trbv8-201ENSMUST00000194020 285 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm37441-201ENSMUST00000194430 678 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm38107-201ENSMUST00000194873 696 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm42832-201ENSMUST00000196361 745 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm42665-201ENSMUST00000202100 586 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm5322-201ENSMUST00000206142 699 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm44513-201ENSMUST00000206811 439 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm2676-201ENSMUST00000207279 606 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Snord14e-201ENSMUST00000082857 90 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm26055-201ENSMUST00000083038 107 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm25480-201ENSMUST00000083217 133 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.13□□□□□ -1.91
Trav13d-3J3QMG8 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Gm15783-201ENSMUST00000117521 633 ntBASIC3.12□□□□□ -1.91
Trav13d-3J3QMG8 Gm12427-201ENSMUST00000117719 302 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms