Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm23422-201ENSMUST00000102000 107 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm23781-201ENSMUST00000157940 308 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm26041-201ENSMUST00000158148 108 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm23660-201ENSMUST00000178362 79 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm24088-201ENSMUST00000179100 79 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm28654-201ENSMUST00000189801 379 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm7692-201ENSMUST00000213534 409 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.55□□□□□ -1.68
Trim55G3X8Y1 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm15147-201ENSMUST00000122263 483 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm26312-201ENSMUST00000157769 165 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm24534-201ENSMUST00000157949 291 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm26001-201ENSMUST00000157989 103 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm24847-201ENSMUST00000158032 108 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm17109-201ENSMUST00000163985 358 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm3027-201ENSMUST00000167579 451 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm17162-201ENSMUST00000168538 473 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm3104-201ENSMUST00000171004 473 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm5777-201ENSMUST00000177265 448 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm23793-201ENSMUST00000179396 117 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm29231-201ENSMUST00000179850 319 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm26746-201ENSMUST00000181722 487 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm2950-201ENSMUST00000185530 520 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28339-201ENSMUST00000185845 696 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28471-201ENSMUST00000185994 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm29062-201ENSMUST00000186032 694 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28598-201ENSMUST00000186490 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28057-201ENSMUST00000186603 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28896-201ENSMUST00000188609 696 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm29268-201ENSMUST00000188669 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28920-201ENSMUST00000189957 699 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm28978-201ENSMUST00000191120 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm37172-201ENSMUST00000191926 615 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm37878-201ENSMUST00000192108 387 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm37881-201ENSMUST00000193001 421 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm9722-201ENSMUST00000194568 802 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm38107-201ENSMUST00000194873 696 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Mir7116-201ENSMUST00000195956 70 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm43631-201ENSMUST00000202011 369 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm44765-201ENSMUST00000206927 601 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm45772-201ENSMUST00000212961 240 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Mir30b-201ENSMUST00000083542 96 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm6361-201ENSMUST00000091031 435 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.54□□□□□ -1.68
Trim55G3X8Y1 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm25419-201ENSMUST00000104215 191 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm13550-201ENSMUST00000118185 525 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm14753-201ENSMUST00000118503 246 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm25019-201ENSMUST00000179732 110 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Mir6400-201ENSMUST00000184870 92 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm28860-201ENSMUST00000188103 313 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms