Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Gm44370-201ENSMUST00000175436 112 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Gm25910-201ENSMUST00000157620 140 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Gm24154-201ENSMUST00000175261 130 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 CT030166.3-201ENSMUST00000223203 193 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Gm24624-201ENSMUST00000082617 164 ntBASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Snord71-201ENSMUST00000104361 85 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Gm14882-201ENSMUST00000117216 218 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Mir7678-201ENSMUST00000185076 71 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Gm42990-201ENSMUST00000199231 312 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col6a3E9PWQ3 Gm22761-201ENSMUST00000102278 96 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm26278-201ENSMUST00000157098 132 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm22565-201ENSMUST00000175540 69 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm18433-201ENSMUST00000192747 197 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Mir10b-201ENSMUST00000083566 68 ntBASIC2.08□□□□□ -2.08
Col6a3E9PWQ3 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm14292-201ENSMUST00000118761 456 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm11446-201ENSMUST00000121319 866 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Col6a3E9PWQ3 Gm27044-201ENSMUST00000183033 796 ntBASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Gm25080-201ENSMUST00000082526 107 ntBASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Gm25038-201ENSMUST00000082928 130 ntBASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.06□□□□□ -2.08
Col6a3E9PWQ3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Mir592-201ENSMUST00000102113 96 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Gm13424-201ENSMUST00000122301 354 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Gm23957-201ENSMUST00000157209 90 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Gm18921-201ENSMUST00000221798 366 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Gm37293-201ENSMUST00000191658 295 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 n-R5s205-201ENSMUST00000083149 125 ntBASIC2.05□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm44319-201ENSMUST00000196974 93 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm25202-201ENSMUST00000082838 191 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm16318-201ENSMUST00000162402 601 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm20997-201ENSMUST00000205148 231 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a3E9PWQ3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm13532-201ENSMUST00000120373 240 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms