Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm9703-201ENSMUST00000119573 343 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm14175-201ENSMUST00000119835 241 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm13967-201ENSMUST00000120404 380 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm13903-201ENSMUST00000120945 193 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm26318-201ENSMUST00000176507 96 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Mir7012-201ENSMUST00000183900 64 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm43408-201ENSMUST00000198263 440 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 CT030166.2-201ENSMUST00000222021 368 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Snord14e-201ENSMUST00000082857 90 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm24316-201ENSMUST00000083041 107 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm24457-201ENSMUST00000083196 105 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm10343-201ENSMUST00000096279 348 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.48□□□□□ -1.53
Prpf40aQ9R1C7 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Mir687-201ENSMUST00000102166 89 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm6274-201ENSMUST00000118173 797 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm11785-201ENSMUST00000120165 601 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm12686-201ENSMUST00000120546 397 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm25290-201ENSMUST00000122796 144 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm23901-201ENSMUST00000157570 107 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Zakit-201ENSMUST00000157677 308 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm22529-201ENSMUST00000158817 123 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm6374-201ENSMUST00000159051 788 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm22917-201ENSMUST00000180116 110 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm45879-201ENSMUST00000212521 392 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm26330-201ENSMUST00000082817 104 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm8074-201ENSMUST00000095071 252 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Prpf40aQ9R1C7 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Prpf40aQ9R1C7 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm12820-201ENSMUST00000119233 342 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm13273-201ENSMUST00000119737 159 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm12704-201ENSMUST00000119789 464 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm14656-201ENSMUST00000120342 502 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm26101-201ENSMUST00000157246 105 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm25637-201ENSMUST00000157529 107 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Mir5129-201ENSMUST00000174938 78 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm22259-201ENSMUST00000178926 107 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm38060-201ENSMUST00000194822 464 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm45403-201ENSMUST00000209453 276 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm20368-201ENSMUST00000220716 301 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.46□□□□□ -1.54
Prpf40aQ9R1C7 Gm23514-201ENSMUST00000082827 130 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms