Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm6501-201ENSMUST00000187178 916 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm42474-201ENSMUST00000201073 505 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm45078-201ENSMUST00000205343 546 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Scn11aQ9R053 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm2544-201ENSMUST00000222702 756 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.66□□□□□ -1.98
Scn11aQ9R053 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Scn11aQ9R053 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.65□□□□□ -1.98
Scn11aQ9R053 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Scn11aQ9R053 Gm25807-201ENSMUST00000122783 305 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Gm23599-201ENSMUST00000157261 251 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Scn11aQ9R053 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Gm17929-201ENSMUST00000186851 627 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Gm3690-201ENSMUST00000211341 262 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Scn11aQ9R053 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.65□□□□□ -1.99
Scn11aQ9R053 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
Scn11aQ9R053 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Scn11aQ9R053 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.65□□□□□ -1.99
Scn11aQ9R053 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm14880-201ENSMUST00000117581 292 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm16510-201ENSMUST00000153501 249 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm24857-201ENSMUST00000158061 310 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm27580-201ENSMUST00000183666 149 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm44083-201ENSMUST00000203114 337 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Scn11aQ9R053 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm14469-201ENSMUST00000118363 202 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm24769-201ENSMUST00000158506 129 ntBASIC2.64□□□□□ -1.99
Scn11aQ9R053 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.64□□□□□ -1.99
Scn11aQ9R053 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Gm15159-201ENSMUST00000117062 764 ntBASIC2.63□□□□□ -1.99
Scn11aQ9R053 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Gm43676-201ENSMUST00000197532 540 ntBASIC2.63□□□□□ -1.99
Scn11aQ9R053 Gm44181-201ENSMUST00000203106 483 ntBASIC2.63□□□□□ -1.99
Scn11aQ9R053 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.63□□□□□ -1.99
Scn11aQ9R053 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Scn11aQ9R053 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm25832-201ENSMUST00000104140 130 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm24840-201ENSMUST00000122603 147 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm28399-201ENSMUST00000186221 318 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm28572-201ENSMUST00000187444 318 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm29524-201ENSMUST00000190819 699 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Mir3069-201ENSMUST00000198802 65 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm26922-201ENSMUST00000082687 72 ntBASIC2.62□□□□□ -1.99
Scn11aQ9R053 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.62□□□□□ -1.99
Scn11aQ9R053 Gm22673-201ENSMUST00000104415 131 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm24478-201ENSMUST00000157439 158 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm13771-201ENSMUST00000117988 238 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm11344-201ENSMUST00000122011 335 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm24076-201ENSMUST00000158179 94 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm23967-201ENSMUST00000175062 78 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm19791-201ENSMUST00000180398 859 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm43406-201ENSMUST00000200356 334 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Gm5655-201ENSMUST00000221078 901 ntBASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Scn11aQ9R053 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
Scn11aQ9R053 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Scn11aQ9R053 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms